Gene

nlrb5

ID

ZDB-GENE-081015-5

Name

NOD-like receptor family B, member 5

Symbol

nlrb5 Nomenclature History

Previous Names

NLR-B5 (1)
NLR-B6 (1)
nalpl1 (1)
nlrp6(3of5) (1)

Type

protein_coding_gene

Location

Chr: 2 Mapping Details/Browsers

Description

Located in cytoplasm. Is expressed in several structures, including female organism; gill; heart; liver; and pleuroperitoneal region. Human ortholog(s) of this gene implicated in vitiligo. Orthologous to human NLRP1 (NLR family pyrin domain containing 1).

Genome Resources

Note

None

Comparative Information

Expression

All Expression Data

3 figures from 3 publications

Cross-Species Comparison

High Throughput Data

Expression Atlas

UO scRNA-seq (UCSC browser)

Single Cell Expression Atlas

Daniocell

Thisse Expression Data

No data available

Wild Type Expression Summary

Phenotype

All Phenotype Data: No data available
Cross-Species Comparison: Alliance

Phenotype Summary

Mutations

Mutants

Sequence Targeting Reagents

Human Disease

Associated With nlrb5 Human Ortholog

No data available

Associated With nlrb5 Via Experimental Models

No data available

Gene Ontology

Protein Domains

Domain, Family, and Site Summary

No data available

Domain Details Per Protein

No data available

Transcripts

Genome Browsers

Ensembl

ZFIN

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
mRNA	nlrb5-202 (1) Ensembl	Ensembl		1,580 nt	Select Tool ZFIN BLAST

Interactions and Pathways

No data available

Antibodies

Name	Type	Antigen Genes	Isotype	Host Organism	Assay	Source	Citations
Ab1-nlrb5		nlrb5		Rabbit			1

Plasmids

No data available

Constructs

Marker Relationships

Sequences

Orthology

Comparative Orthology: Alliance
Gene Tree: Ensembl

Citations