Gene
atg16l1
- ID
- ZDB-GENE-050417-401
- Name
- ATG16 autophagy related 16-like 1 (S. cerevisiae)
- Symbol
- atg16l1 Nomenclature History
- Previous Names
-
- fb57e05
- wu:fb57e05
- zgc:110147
- Type
- protein_coding_gene
- Location
- Chr: 15 Mapping Details/Browsers
- Description
- Predicted to be involved in autophagosome assembly and negative stranded viral RNA replication. Predicted to localize to autophagosome membrane. Human ortholog(s) of this gene implicated in inflammatory bowel disease 10. Is expressed in intestine. Orthologous to human ATG16L1 (autophagy related 16 like 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 3 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- MGC:110147 (1 image)
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| inflammatory bowel disease 10 | Alliance | {Inflammatory bowel disease (Crohn disease) 10} | 611081 |
Domain, Family, and Site Summary
Domain Details Per Protein
| Protein | Length | Autophagy-related protein 16 | Autophagy-related protein 16 domain |
|---|---|---|---|
|
UniProtKB:Q568R2
|
330 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
atg16l1-201
(1)
|
Ensembl | 1,866 nt | ||
| mRNA |
atg16l1-202
(1)
|
Ensembl | 4,727 nt | ||
| mRNA |
atg16l1-203
(1)
|
Ensembl | 699 nt | ||
| mRNA |
atg16l1-204
(1)
|
Ensembl | 990 nt |
Interactions and Pathways
No data available
Plasmids
No data available