Gene
hapln1a
- ID
- ZDB-GENE-050302-175
- Name
- hyaluronan and proteoglycan link protein 1a
- Symbol
- hapln1a Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 5 Mapping Details/Browsers
- Description
- Predicted to have hyaluronic acid binding activity. Involved in fin regeneration. Predicted to localize to extracellular matrix. Is expressed in several structures, including adaxial cell; hypochord; notochord; pharyngeal arch; and rhombomere. Orthologous to human HAPLN1 (hyaluronan and proteoglycan link protein 1).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 18 figures from 10 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- 2 figures from Derrick et al., 2021
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Domain | IPR000538 | Link domain |
| Domain | IPR003599 | Immunoglobulin domain subtype |
| Domain | IPR007110 | Immunoglobulin-like domain |
| Domain | IPR013106 | Immunoglobulin V-set domain |
| Family | IPR050691 | Hyaluronan-binding Proteoglycan |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
| Homologous_superfamily | IPR016187 | C-type lectin fold |
| Homologous_superfamily | IPR036179 | Immunoglobulin-like domain superfamily |
Domain Details Per Protein
| Protein | Length | C-type lectin fold | C-type lectin-like/link domain superfamily | Hyaluronan-binding Proteoglycan | Immunoglobulin domain subtype | Immunoglobulin-like domain | Immunoglobulin-like domain superfamily | Immunoglobulin-like fold | Immunoglobulin V-set domain | Link domain |
|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:Q1LXE1
|
336 | |||||||||
|
UniProtKB:B3DIH3
|
328 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
hapln1a-201
(1)
|
Ensembl | 585 nt | ||
| mRNA |
hapln1a-202
(1)
|
Ensembl | 4,922 nt | ||
| mRNA |
hapln1a-203
(1)
|
Ensembl | 4,877 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab2-HAPLN1a | polyclonal | Rabbit |
|
Proteintech
|
1 |
Plasmids
No data available