Gene
pcdh1a6
- ID
- ZDB-GENE-050203-2
- Name
- protocadherin 1 alpha 6
- Symbol
- pcdh1a6 Nomenclature History
- Previous Names
-
- DrPcdh1ab4 (1)
- Type
- protein_coding_gene
- Location
- Chr: 10 Mapping Details/Browsers
- Description
- Predicted to be involved in cell adhesion. Predicted to localize to integral component of plasma membrane.
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 2 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
- No data available
Wild Type Expression Summary
- All Phenotype Data
- No data available
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR020894 | Cadherin conserved site |
| Domain | IPR002126 | Cadherin-like |
| Domain | IPR013164 | Cadherin, N-terminal |
| Domain | IPR031904 | Cadherin, C-terminal catenin-binding domain |
| Domain | IPR032455 | Cadherin, cytoplasmic C-terminal domain |
| Family | IPR050174 | Protocadherin/Cadherin-related Cell Adhesion |
| Homologous_superfamily | IPR015919 | Cadherin-like superfamily |
Domain Details Per Protein
| Protein | Length | Cadherin conserved site | Cadherin, C-terminal catenin-binding domain | Cadherin, cytoplasmic C-terminal domain | Cadherin-like | Cadherin-like superfamily | Cadherin, N-terminal | Protocadherin/Cadherin-related Cell Adhesion |
|---|---|---|---|---|---|---|---|---|
|
UniProtKB:I6LC33
|
939 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
pcdh1a6-201
(1)
|
Ensembl | 723 nt | ||
| mRNA |
pcdh1a6-204
(1)
|
Ensembl | 1,928 nt | ||
| mRNA |
zgc:123181-202
(1)
|
Ensembl | 1,813 nt | ||
| mRNA |
zgc:123181-203
(1)
|
Ensembl | 5,299 nt |
Interactions and Pathways
No data available
Plasmids
No data available
- Comparative Orthology
- Alliance