Gene
colec12
- ID
- ZDB-GENE-030131-9807
- Name
- collectin sub-family member 12
- Symbol
- colec12 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 2 Mapping Details/Browsers
- Description
- Predicted to enable low-density lipoprotein particle binding activity and pattern recognition receptor activity. Acts upstream of or within vasculogenesis. Predicted to be located in membrane. Predicted to be part of collagen trimer. Predicted to be active in collagen-containing extracellular matrix and extracellular space. Is expressed in several structures, including cardiovascular system; epidermis; mesoderm; musculature system; and periderm. Orthologous to human COLEC12 (collectin subfamily member 12).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 10 figures from 3 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb377 (12 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Fukuda et al., 2011
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR018378 | C-type lectin, conserved site |
| Domain | IPR001304 | C-type lectin-like |
| Family | IPR052376 | Oxidative Scavengers and Glycosyltransferases |
| Homologous_superfamily | IPR016186 | C-type lectin-like/link domain superfamily |
| Homologous_superfamily | IPR016187 | C-type lectin fold |
| Repeat | IPR008160 | Collagen triple helix repeat |
Domain Details Per Protein
| Protein | Additional Resources | Length | Collagen triple helix repeat | C-type lectin, conserved site | C-type lectin fold | C-type lectin-like | C-type lectin-like/link domain superfamily | Oxidative Scavengers and Glycosyltransferases |
|---|---|---|---|---|---|---|---|---|
| UniProtKB:A0A8M2BAJ9 | InterPro | 740 | ||||||
| UniProtKB:A5PMY6 | InterPro | 720 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
colec12-201
(1)
|
Ensembl | 4,850 nt |
Interactions and Pathways
No data available
| Name | Type | Antigen Genes | Isotype | Host Organism | Assay | Source | Citations |
|---|---|---|---|---|---|---|---|
| Ab1-colec12 | polyclonal | IgG | Rabbit |
|
1 |
Plasmids
No data available