FIGURE

Figure 1

ID
ZDB-FIG-220314-62
Publication
Rozenblat et al., 2022 - Genetic and Neurological Deficiencies in the Visual System of mct8 Mutant Zebrafish
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Figure 1

Figure 1. Transcriptome profiling in mct8−/− larvae. (A) Differentially expressed genes in 6 days post-fertilization (dpf) mct8−/− and wild-type (WT) sibling larvae (n = 3 batches for each genotype). Green vertical lines differentiate between significant and insignificant expressed genes. Blue and red dots mark down-regulated and up-regulated genes (1 < log2 [fold change] < 1, adjusted p-value (p-adj) < 0.05), respectively. Black dots mark insignificant expressed genes. Orange circles mark genes validated by qRT-PCR. (B) Representative enriched gene pathways in mct8−/− larvae. The red vertical line marks the threshold of significantly enriched pathways (p-adj ≤ 0.05). (C) Normalized reads count of four differentially expressed genes selected from the enriched vision pathways shown in B. X-axis represents the sample number in each genotype. (D) Relative gene expression of selected genes was quantified using qRT-PCR and normalized against actb (n = 5 batches of larvae for each group). Statistical significance determined by t-test: two-sample. ** p < 0.01, **** p < 0.0001.

Expression Data
Genes:
Fish:
Anatomical Term:
Stage: Day 6

Expression Detail
Antibody Labeling
Phenotype Data
Fish:
Observed In:
Stage: Day 6

Phenotype Detail
Acknowledgments
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