ZFIN All Figures, Desvignes <i>et al.</i>, 2022

Desvignes et al., 2022

ZDB-PUB-220126-55
PMID:35020925
Fig. 1
Fig. 2
Fig. 3

FIGURE SUMMARY

Title: FishmiRNA: An evolutionarily supported microRNA annotation and expression database for ray-finned fishes
Authors: Desvignes, T., Bardou, P., Montfort, J., Sydes, J., Guyomar, C., George, S., Postlethwait, J.H., Bobe, J.
Source: Full text @ Mol Bio Evol

Fig. 1

General statistics of the FishmiRNA database. Screen shot of the home page. On the left, the species present in FishmiRNA database are displayed in their phylogenetic context (Rabosky et al. 2018). On the right, the miRNA gene (in blue) and mature miRNA (in red) annotation statistics are given for each species.

Fig. 2

Exploring the FishmiRNA Annotation database. Screen shot of the Annotation section of the database. Users can choose to add or remove columns in the display and can filter and search the database by species, miRNA gene and mature miRNA names, and orthology among species. The entire annotation database, or subsets of it, can be exported in various convenient formats. The magnifier icon opens the corresponding gene identification card that contains all the FishmiRNA information related to this gene. Selecting genes using tick boxes on the left allows the filtering of the FishmiRNA expression database for mature products of selected genes.

Fig. 3

ZFIN is incorporating published figure images and captions as part of an ongoing project. Figures from some publications have not yet been curated, or are not available for display because of copyright restrictions.

EXPRESSION / LABELING:

Genes:	dre-let-7h dre-let-7i dre-mir-7ba dre-mir-15b dre-mir-26b dre-mir-27e dre-mir-30b dre-mir-31 dre-mir-96 dre-mir-99-1 dre-mir-99-2 dre-mir-107 dre-mir-130a-1 dre-mir-135a dre-mir-139 dre-mir-143-1 dre-mir-146b-1 dre-mir-152 dre-mir-153a dre-mir-182 dre-mir-183 dre-mir-190a dre-mir-205 dre-mir-214aos dre-mir-216a dre-mir-216b dre-mir-222 dre-mir-301a-1 dre-mir-429 dre-mir-451a dre-mir-462 dre-mir-551 dre-mir-723 dre-mir-731 dre-mir-2184 dre-mir-2187 dre-mir-7132 dre-mir-7547os mir10a mir10c mir10d mir15c mir16a mir16b mir16c mir18a mir18b mir18c mir19c mir19d mir20b mir22b mir25 mir27a mir27b mir27c mir27d mir30a mir30d mir34a mir34b mir34c mir92b mir93 mir101a mir101b mir107b mir122 mir125c mir130b mir133b mir133c mir135b mir140 mir141 mir144 mir145 mir146a mir150 mir153b mir153c mir155 mir181c mir181d mir187 mir190b mir192 mir193b mir194a mir194b mir196b mir196d mir200a mir200b mir200c mir202 mir203a mir203b mir210 mir214a mir217-1 mir218b mir222b mir222c mir223 mir301b mir301c mir363 mir429b mir454a mir454b mir456 mir457a mir457b mir458 mir459 mir460 mir489 mir725 mir726 mir729 mir730 mir732 mir734 mir737 mir1306 mir1388 mir2187b mir2188 mir2189 mir2191 mir3618 mir7133 mir7145 mir7146 mir7147 mir7148 mir7547 mir10585 mir10965-1 mir10965-2 mirlet7f mirlet7j
Fish:	AB
Anatomical Terms:	brain heart ovary testis
Stage:	Adult

Expression / Labeling details

Acknowledgments

This image is the copyrighted work of the attributed author or publisher, and ZFIN has permission only to display this image to its users. Additional permissions should be obtained from the applicable author or publisher of the image. Full text @ Mol Bio Evol

Desvignes et al., 2022 ZDB-PUB-220126-55 PMID:35020925

FishmiRNA: An evolutionarily supported microRNA annotation and expression database for ray-finned fishes

Desvignes et al., 2022

ZDB-PUB-220126-55
PMID:35020925