Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
5	40.9 cM	z22523	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
5	119.77 cR	Z22523	Loeb/NIH/5000/4000 (LN54)	Dawid, Igor B.	Data
5	44.0 cM	z22523	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
bmp10	GENE	5		Bland, 2001	Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523  ... Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523 and z2095l on LG5.
z20951	SSLP	5		Bland, 2001	Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523  ... Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523 and z2095l on LG5.
gbgt1l4	GENE	5		Hirata et al., 2012	Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map  ... Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map mi264 to the gene cx39.9 on Chr.5 between the mtmr2 and gbgt1l4 genes, and the flanking markers z22523 and z13245.
mtmr2	GENE	5		Hirata et al., 2012	Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map  ... Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map mi264 to the gene cx39.9 on Chr.5 between the mtmr2 and gbgt1l4 genes, and the flanking markers z22523 and z13245.
mi264	Feature	5		Hirata et al., 2012	Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map  ... Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map mi264 to the gene cx39.9 on Chr.5 between the mtmr2 and gbgt1l4 genes, and the flanking markers z22523 and z13245.
gja2	GENE	5	1.03 cM	Hirata et al., 2012	Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map  ... Hirata, et al. (2012. J Biol Chem. 287:1080-9.) used meiotic mapping to map mi264 to the gene cx39.9 on Chr.5 between the mtmr2 and gbgt1l4 genes, and the flanking markers z22523 and z13245.
glra4b	GENE	5	0.0 cR	Imboden et al., 2001	Imboden, et al. (2001. Dev Genes Evol 211:415-422.) report mapping glra4b to LG05 0.00cR from z22523 on the LN54 mapping panel.
fk59e08	EST	5		Totong et al., 2011
sk38	Feature	5		Totong et al., 2011
fb14b05	EST	5		Totong et al., 2011
cemip2	GENE	5		Totong et al., 2011
z61852	SSLP	5		Totong et al., 2011

OTHER MAPPING INFORMATION

Chr 5 Bland, 2001 Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523 and z2095l on LG5. Bland (2001) mapped bmp10 onto the LN54 panel between the SSLP markers z22523 and z2095l on LG5.   Chr 5 Totong et al., 2011

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	188,182		60.0
Forward Primer	CTCCACTGCCATCTGACTGA
Reverse Primer	TGCATCTTACGCTTTGTTGC
IND	182,0,164		60.0
Forward Primer	CTCCACTGCCATCTGACTGA
Reverse Primer	TGCATCTTACGCTTTGTTGC
EKW	192,0,188		60.0
Forward Primer	CTCCACTGCCATCTGACTGA
Reverse Primer	TGCATCTTACGCTTTGTTGC
TU	188,162		60.0
Forward Primer	CTCCACTGCCATCTGACTGA
Reverse Primer	TGCATCTTACGCTTTGTTGC