Mapping Details

GENETIC MAPPING PANELS

Chr	Location	Mapped As	Panel	Mapped By	Scoring
21	38.1 cM	z11532	Boston MGH Cross (MGH)	Fishman, Mark C.	Data
21	2066.0 cR	z11532	Goodfellow T51 (T51)	Geisler, Robert	Data
21	68.0 cM	z11532	Heat Shock (HS)	Woods, Ian G.	Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS

Marker	Type	Chr	Distance	Publication / Person	Comments
z26044	SSLP	21		Catalano et al., 2007	Catlano et al. (2007) report that a bulk segregant mapping analysis revealed  ... Catlano et al. (2007) report that a bulk segregant mapping analysis revealed that the dou yan gene localizes to a genomic region that is flanked by markers S11532 abd Z26044 on chromosome 21.
doy	GENE	21		Catalano et al., 2007	Catlano et al. (2007) report that a bulk segregant mapping analysis revealed  ... Catlano et al. (2007) report that a bulk segregant mapping analysis revealed that the dou yan gene localizes to a genomic region that is flanked by markers S11532 abd Z26044 on chromosome 21.
z25665	SSLP	21		Iwanami et al., 2011	Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022  ... Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022 (t21380) to il7r on chromosome 21 (CU466287), based on linkage analysis with markers z11532 and z25665.
t21380	Feature	21		Iwanami et al., 2011	Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022  ... Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022 (t21380) to il7r on chromosome 21 (CU466287), based on linkage analysis with markers z11532 and z25665.
il7r	GENE	21		Iwanami et al., 2011	Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022  ... Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022 (t21380) to il7r on chromosome 21 (CU466287), based on linkage analysis with markers z11532 and z25665.

OTHER MAPPING INFORMATION

Chr 21 Catalano et al., 2007 Catlano et al. (2007) report that a bulk segregant mapping analysis revealed that the dou yan gene  ... Catlano et al. (2007) report that a bulk segregant mapping analysis revealed that the dou yan gene localizes to a genomic region that is flanked by markers S11532 abd Z26044 on chromosome 21.   Chr 21 Iwanami et al., 2011 Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022 (t21380) to il7r on  ... Iwanami, et al. (2011. J. Immunol. 186(12):7060-6.) reports mapping HY022 (t21380) to il7r on chromosome 21 (CU466287), based on linkage analysis with markers z11532 and z25665.

Primer Sets:

Strain	Bandsize	Restriction Enzyme	Annealing Temperature [C]
AB	231,209		60.0
Forward Primer	ACGATGCTCCTGGATAATGC
Reverse Primer	TCCTATTCTGAGCATGTGCG
IND	197,0,223		60.0
Forward Primer	ACGATGCTCCTGGATAATGC
Reverse Primer	TCCTATTCTGAGCATGTGCG
EKW	213,189		60.0
Forward Primer	ACGATGCTCCTGGATAATGC
Reverse Primer	TCCTATTCTGAGCATGTGCG
TU	231,0,227		60.0
Forward Primer	ACGATGCTCCTGGATAATGC
Reverse Primer	TCCTATTCTGAGCATGTGCG