ZFIN ID: ZDB-GENE-000926-1

Mapping Details

Gene Name:	atonal bHLH transcription factor 7
Symbol:	atoh7

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	13	25,449,681 - 25,450,725	GRCz11
Ensembl	13	25,449,681 - 25,450,725	GRCz11
Vega	13	25,319,231 - 25,320,275	GRCv10
NCBI Map Viewer	13	25,449,699 - 25,450,724	GRCz11
UCSC	13	-	GRCz11

Mapped Clones containing atoh7
RP71-PACKTRZ	Chr: 13 Details
DKEY-51A16	Chr: 13 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
sa16352	13	25,449,912	GRCz11	Busch-Nentwich et al., 2013
	13	25,319,462	GRCz10	Busch-Nentwich et al., 2013
	13	25,673,802	Zv9	Busch-Nentwich et al., 2013
sa35489	13	25,450,046	GRCz11	Busch-Nentwich et al., 2013
	13	25,319,596	GRCz10	Busch-Nentwich et al., 2013
	13	25,673,936	Zv9	Busch-Nentwich et al., 2013
th241	13	25,449,886	GRCz11	Kay et al., 2001

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
13	2143.0 cR	ath5	Goodfellow T51 (T51)	Finger-Baier, Karin	Data
13	2143.0 cR	atoh7	Goodfellow T51 (T51)	Masai, Ichiro	Data
13	52.9 cM	atoh7	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
z15777	SSLP	13	3.85 cM	Kay et al., 2001	Kay et al. (2001. Neuron 30:725-736) report mapping lak th241 to a 0.7 cM region on LG 13 between z15777 and z10582. They also mapped atoh7 to the same region using the T51 radiation hybrid panel. They cloned atoh7 from lak th241 and showed that there was a point mutation, which was confirmed by RFLP analysis.
z10582	SSLP	13	0.71 cM	Kay et al., 2001	Kay et al. (2001. Neuron 30:725-736) report mapping lak th241 to a 0.7 cM region on LG 13 between z15777 and z10582. They also mapped atoh7 to the same region using the T51 radiation hybrid panel. They cloned atoh7 from lak th241 and showed that there was a point mutation, which was confirmed by RFLP analysis.

OTHER MAPPING INFORMATION: No data available