ZFIN ID: ZDB-GENE-030605-1

ZFIN ID: ZDB-GENE-030605-1

Mapping Details

Gene Name:	SWI/SNF related BAF chromatin remodeling complex subunit ATPase 4a
Symbol:	smarca4a

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	3	19,245,804 - 19,281,878	GRCz11
Ensembl	3	19,245,804 - 19,281,878	GRCz11
Vega	3	19,096,064 - 19,132,138	GRCv10
NCBI Map Viewer	3	19,245,806 - 19,281,878	GRCz11
UCSC	3	-	GRCz11

Mapped Clones containing smarca4a
CH211-224D23	Chr: 3 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
a8	3	19,256,681	GRCz11	Gregg et al., 2003
hzu13	3	19,249,129 - 19,249,135	GRCz11	Tu et al., 2020
sa12514	3	19,262,441	GRCz11	Busch-Nentwich et al., 2013
	3	19,112,701	GRCz10	Busch-Nentwich et al., 2013
	3	19,084,339	Zv9	Busch-Nentwich et al., 2013
sa19981	3	19,267,969	GRCz11	Busch-Nentwich et al., 2013
	3	19,118,229	GRCz10	Busch-Nentwich et al., 2013
	3	19,089,867	Zv9	Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
3	38.9 cM	smarca4	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

Genomic Feature s481 is an allele of smarca4a

Marker	Type	Chr	Distance	Publication / Person	Comments
z59420	SSLP	3		Takeuchi et al., 2011	Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP ...
z5623	SSLP	3		Takeuchi et al., 2011	Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP ...

Genomic Feature a8 is an allele of smarca4a

Marker	Type	Chr	Distance	Publication / Person	Comments
z1140	SSLP	3		Gregg et al., 2003
z5623	SSLP	3		Gregg et al., 2003

Genomic Feature s481 is an allele of smarca4a

Chr 3

Taeuchi et al. (2011, Nat. Commun. 2:187) mapped s481 to Chr.3 using SSLP markers.

Genomic Feature a8 is an allele of smarca4a

Chr 3

Genomic Feature hzu13 is an allele of smarca4a