ZFIN ID: ZDB-GENE-020129-1

Mapping Details

Gene Name: calcium channel, voltage-dependent, L type, alpha 1C subunit
Symbol: cacna1c
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 4 20,318,127 - 20,474,972 GRCz11
Ensembl 4 20,318,127 - 20,474,972 GRCz11
Vega 4 20,597,152 - 20,753,997 GRCv10
NCBI Map Viewer 4 20,308,987 - 20,480,303 GRCz11
UCSC 4 - GRCz11
Mapped Clones containing cacna1c
CH211-87P6 Chr: 4 Details
DKEY-65M5 Chr: 4 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
a366 4 20,372,569 - 20,372,571 GRCz11 Zebrafish Nomenclature Committee
4 20,372,569 - 20,372,571 GRCz11 Zebrafish Nomenclature Committee
4 20,372,569 - 20,372,571 GRCz11 Thyme et al., 2019
biz102 4 20,372,424 - 20,372,428 GRCz11 Pluimer et al., 2023
sa6050 4 20,436,120 GRCz11 Busch-Nentwich et al., 2013
4 20,715,145 GRCz10 Busch-Nentwich et al., 2013
4 19,371,810 Zv9 Busch-Nentwich et al., 2013
sa6943 4 20,446,938 GRCz11 Busch-Nentwich et al., 2013
4 20,725,963 GRCz10 Busch-Nentwich et al., 2013
4 19,382,628 Zv9 Busch-Nentwich et al., 2013
sa10930 4 20,436,045 GRCz11 Busch-Nentwich et al., 2013
4 20,715,070 GRCz10 Busch-Nentwich et al., 2013
4 19,371,735 Zv9 Busch-Nentwich et al., 2013
sa15296 4 20,464,942 GRCz11 Busch-Nentwich et al., 2013
4 20,743,967 GRCz10 Busch-Nentwich et al., 2013
4 19,400,632 Zv9 Busch-Nentwich et al., 2013
sa38439 4 20,452,012 GRCz11 Busch-Nentwich et al., 2013
4 20,731,037 GRCz10 Busch-Nentwich et al., 2013
4 19,387,702 Zv9 Busch-Nentwich et al., 2013
sa40287 4 20,447,953 GRCz11 Busch-Nentwich et al., 2013
4 20,726,978 GRCz10 Busch-Nentwich et al., 2013
4 19,383,643 Zv9 Busch-Nentwich et al., 2013
sa44588 4 20,447,415 GRCz11 Busch-Nentwich et al., 2013
4 20,726,440 GRCz10 Busch-Nentwich et al., 2013
4 19,383,105 Zv9 Busch-Nentwich et al., 2013
la015364Tg 4 19,361,020 - 19,361,030 Zv9

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z11566 SSLP 4 Rottbauer et al., 2001 Using bulked segregant analysis and finer genetic mapping, Rottbauer, et al. (2001. Dev Cell 1:265-275.) report mapping cacna1c to LG04 in the ~0.6cM interval between z11657 and z11566. A physical map of this region was generated using YACs and BACs.
z11657 SSLP 4 Rottbauer et al., 2001 Using bulked segregant analysis and finer genetic mapping, Rottbauer, et al. (2001. Dev Cell 1:265-275.) report mapping cacna1c to LG04 in the ~0.6cM interval between z11657 and z11566. A physical map of this region was generated using YACs and BACs.

OTHER MAPPING INFORMATION
Chr 4 Rottbauer et al., 2001 Using bulked segregant analysis and finer genetic mapping, Rottbauer, et al. (2001. Dev Cell  ...
Genomic Feature sa6050 is an allele of cacna1c
Your Input Welcome
We welcome your input and comments. Please use this form to recommend updates to the information in ZFIN. We appreciate as much detail as possible and references as appropriate. We will review your comments promptly.
Please check the highlighted fields and try again.
Thank you for submitting comments. Your input has been emailed to ZFIN curators who may contact you if additional information is required.
Oops. Something went wrong. Please try again later.