ZFIN ID: ZDB-GENE-041014-322

Mapping Details

Gene Name: hemicentin 1
Symbol: hmcn1
PHYSICAL MAP AND BROWSER
Genome Browser Chr Position Assembly
ZFIN JBrowse 20 34,157,308 - 34,292,607 GRCz11
Ensembl 20 34,157,308 - 34,292,607 GRCz11
Vega 20 34,254,429 - 34,389,728 GRCv10
NCBI Map Viewer 20 34,157,308 - 34,292,607 GRCz11
UCSC 20 - GRCz11
Mapped Clones containing hmcn1
DKEYP-11G8 Chr: 20 Details
CH211-169J21 Chr: 20 Details
PHYSICAL MAPPING
Feature Chr Position Assembly Citations
sa9806 20 34,219,904 GRCz11 Busch-Nentwich et al., 2013
20 34,317,025 GRCz10 Busch-Nentwich et al., 2013
20 34,244,512 Zv9 Busch-Nentwich et al., 2013
sa11019 20 34,177,726 GRCz11 Busch-Nentwich et al., 2013
20 34,274,847 GRCz10 Busch-Nentwich et al., 2013
20 34,202,334 Zv9 Busch-Nentwich et al., 2013
sa16438 20 34,193,730 GRCz11 Busch-Nentwich et al., 2013
20 34,290,851 GRCz10 Busch-Nentwich et al., 2013
20 34,218,338 Zv9 Busch-Nentwich et al., 2013
sa17994 20 34,191,691 GRCz11 Busch-Nentwich et al., 2013
20 34,288,812 GRCz10 Busch-Nentwich et al., 2013
20 34,216,299 Zv9 Busch-Nentwich et al., 2013
sa19239 20 34,177,726 GRCz11 Busch-Nentwich et al., 2013
20 34,274,847 GRCz10 Busch-Nentwich et al., 2013
20 34,202,334 Zv9 Busch-Nentwich et al., 2013
sa23756 20 34,171,930 GRCz11 Busch-Nentwich et al., 2013
20 34,269,051 GRCz10 Busch-Nentwich et al., 2013
20 34,196,538 Zv9 Busch-Nentwich et al., 2013
sa23757 20 34,212,658 GRCz11 Busch-Nentwich et al., 2013
20 34,309,779 GRCz10 Busch-Nentwich et al., 2013
20 34,237,266 Zv9 Busch-Nentwich et al., 2013
sa30717 20 34,171,186 GRCz11 Busch-Nentwich et al., 2013
20 34,268,307 GRCz10 Busch-Nentwich et al., 2013
20 34,195,794 Zv9 Busch-Nentwich et al., 2013
sa32306 20 34,171,360 GRCz11 Busch-Nentwich et al., 2013
20 34,268,481 GRCz10 Busch-Nentwich et al., 2013
20 34,195,968 Zv9 Busch-Nentwich et al., 2013
sa32307 20 34,207,947 GRCz11 Busch-Nentwich et al., 2013
20 34,305,068 GRCz10 Busch-Nentwich et al., 2013
20 34,232,555 Zv9 Busch-Nentwich et al., 2013
sa37092 20 34,186,503 GRCz11 Busch-Nentwich et al., 2013
20 34,283,624 GRCz10 Busch-Nentwich et al., 2013
20 34,211,111 Zv9 Busch-Nentwich et al., 2013
sa37093 20 34,195,423 GRCz11 Busch-Nentwich et al., 2013
20 34,292,544 GRCz10 Busch-Nentwich et al., 2013
20 34,220,031 Zv9 Busch-Nentwich et al., 2013
sa37094 20 34,219,636 GRCz11 Busch-Nentwich et al., 2013
20 34,316,757 GRCz10 Busch-Nentwich et al., 2013
20 34,244,244 Zv9 Busch-Nentwich et al., 2013
sa37095 20 34,219,698 GRCz11 Busch-Nentwich et al., 2013
20 34,316,819 GRCz10 Busch-Nentwich et al., 2013
20 34,244,306 Zv9 Busch-Nentwich et al., 2013
sa39291 20 34,205,649 GRCz11 Busch-Nentwich et al., 2013
20 34,302,770 GRCz10 Busch-Nentwich et al., 2013
20 34,230,257 Zv9 Busch-Nentwich et al., 2013
sa43488 20 34,158,778 GRCz11 Busch-Nentwich et al., 2013
20 34,255,899 GRCz10 Busch-Nentwich et al., 2013
20 34,183,386 Zv9 Busch-Nentwich et al., 2013
sa43489 20 34,190,754 GRCz11 Busch-Nentwich et al., 2013
20 34,287,875 GRCz10 Busch-Nentwich et al., 2013
20 34,215,362 Zv9 Busch-Nentwich et al., 2013

GENETIC MAPPING PANELS: No data available
MAPPING FROM PUBLICATIONS
Marker Type Chr Distance Publication / Person Comments
z35375 SSLP 20 Carney et al., 2010
tq207 Feature 20 Carney et al., 2010
fr22 Feature 20 Carney et al., 2010

OTHER MAPPING INFORMATION
Chr 20 Carney et al., 2010
Genomic Feature tq207 is an allele of hmcn1
Chr Location Mapped As Panel Mapped By Scoring
20 76.4 cM tq207 Boston MGH Cross (MGH) Geisler, Robert Data
Note: Physical map location as displayed in the genome browsers is more precise than linkage map location.
Physical map location should be used whenever possible.
Genomic Feature fr22 is an allele of hmcn1
Marker Type Chr Distance Publication / Person Comments
tq207 Feature 20 Carney et al., 2010
hmcn1 GENE 20 Carney et al., 2010
z35375 SSLP 20 Carney et al., 2010
Genomic Feature tq207 is an allele of hmcn1
Marker Type Chr Distance Publication / Person Comments
hmcn1 GENE 20 Carney et al., 2010
z35375 SSLP 20 Carney et al., 2010
fr22 Feature 20 Carney et al., 2010
Genomic Feature fr22 is an allele of hmcn1
Chr 20 Carney et al., 2010
Genomic Feature tq207 is an allele of hmcn1
Chr 20 Carney et al., 2010
Genomic Feature sa17994 is an allele of hmcn1
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