ZFIN ID: ZDB-GENE-030131-8415

Mapping Details

Gene Name:	collagen, type I, alpha 2
Symbol:	col1a2

PHYSICAL MAP AND BROWSER

Genome Browser	Chr	Position	Assembly
ZFIN JBrowse	19	40,983,221 - 41,002,980	GRCz11
Ensembl	19	40,983,221 - 41,002,980	GRCz11
Vega	19	41,396,101 - 41,415,860	GRCv10
NCBI Map Viewer	19	40,983,221 - 41,002,336	GRCz11
UCSC	19	-	GRCz11

Mapped Clones containing col1a2
DKEY-104M9	Chr: 19 Details

PHYSICAL MAPPING

Feature	Chr	Position	Assembly	Citations
ca108	19	40,989,583	GRCz11	Rajan et al., 2020
ihb230	19	40,990,941 - 40,990,942	GRCz11	ZFIN Staff
sa1763	19	40,985,164	GRCz11	Busch-Nentwich et al., 2013
	19	41,398,044	GRCz10	Busch-Nentwich et al., 2013
	19	41,945,790	Zv9	Busch-Nentwich et al., 2013
sa17981	19	40,987,547	GRCz11	Busch-Nentwich et al., 2013
	19	41,400,427	GRCz10	Busch-Nentwich et al., 2013
	19	41,948,173	Zv9	Busch-Nentwich et al., 2013
sa32257	19	40,998,731	GRCz11	Busch-Nentwich et al., 2013
	19	41,411,611	GRCz10	Busch-Nentwich et al., 2013
	19	41,959,357	Zv9	Busch-Nentwich et al., 2013
sa36897	19	40,999,220	GRCz11	Busch-Nentwich et al., 2013
	19	41,412,100	GRCz10	Busch-Nentwich et al., 2013
	19	41,959,846	Zv9	Busch-Nentwich et al., 2013
la013496Tg	19	41,949,461 - 41,949,471	Zv9

GENETIC MAPPING PANELS
Chr	Location	Mapped As	Panel	Mapped By	Scoring
19	99.1 cM	col1a2	Heat Shock (HS)	Woods, Ian G.	Data

Note: Physical map location as displayed in the genome browsers is more precise than linkage map location. Note: Physical map location should be used whenever possible.

MAPPING FROM PUBLICATIONS
Marker	Type	Chr	Distance	Publication / Person	Comments
dlx6a	GENE	19		Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z11403	SSLP	19		Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z6661	SSLP	19		Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...
z7265	SSLP	19		Fisher et al., 2003	Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 ...

Chr 19

Fisher et al., 2003

Fisher S et al. (Dev. Biol. 264, 64-76) mapped the col1a2 gene to LG 19 between Z11403 and Z7265 ...

Markers Encoded by col1a2
fb11d06 Chr: 19 Details
fa98d05 Chr: 19 Details
fa99g10 Chr: 19 Details
fb04c08 Chr: 19 Details

Genomic Feature sa17981 is an allele of col1a2