Genomic Feature

ihb754

ID
ZDB-ALT-240402-4
Name
ihb754
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Yonghua Sun Lab
Current Source
China Zebrafish Resource Center (CZRC)    ( order this )
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 25: 9005241 - 9005245 (GRCz11) (1) Details
Nucleotide change
agggg/-
Variant Notes
5bp deletion,Between 232bp to 236bp of the wild-type rag1 coding sequence,  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
5 bp deleted in Exon 3 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
CCCTGTGCAAAATGAAACACCGGTGGAGAAGGAAAACCAGCCTGAGCTGGCAATGGAGAAGACAAGCTCTCAAGGCAGTGTTATGAGGCTCTGTTTTGGAGGGAAGAGCAAAGAAAATGTGGAGAGTGCTCGAGGGAGAGTGGACCTTAAGCTACAGGAGATTGATACACACATGAATCTTCTCAAGTGAGTATAATAAAAAATCTATTGTTTACATTCATAATGTTAATTCATTTTTAATGTTTATCAAGCTTCTTGCTTTTGTCCTATGTAGAAACATGTGCCGCCTTTGTGGCATTGCAATACAGAAGGCTAAAGGTCCATCACATGAAGTTCAGGGGGTTTTGGAGGAGTCAAGCAGATGTGCCTTACGCAGGATGGGCTGCAAGCTGGTGACCTGGCCGGAGGTGATCTTGAAGGTCTTCAAGGTGGATGTGACAACCGATATGGAGACGGTTCATCCGTCTTTGTTTTGTCACAGGTGCTGGACTGCTGCCATA
agggg/- AGGGGGTTTCTGTTCCTTCACCAATACCCGAATCCCAGACTGGAAGCCCCACACCTCTCAATGCAACCTTTGCTTCCCTAAAAAGAGCTCTTTTCAGCGGGTAGGAAAGAAGCGGACTAAACCACTTAAAAGTGCACACATCCTTCCTAAGAGATTCAGGAGGGACTCGTCAGAATCCTCAAGAGTGTGGAGACAGACCACAGAGAATCCAGATGGGAAAGAATGGTTAAAACTATCAGTTCAGAGAGGACAGTGGGTAAAGAATATCACACGGTGCCAGAGGGACCATCTGAGCACTAAGCTCATCCCCACTGAAGTCCCAGCAGACTTGATACGCGCAGTTACTTGCCAAGTGTGTGATCACCTGCTTTCTGACCCCGTCCAATCACCATGTCGACACCTGTTCTGTCGGCTGTGCATTATAAGGTACACCCATGCTTTGGGCCCAAACTGTCCCACCTGTAACCAACACCTGAACCCATCTCACTTAATCAAGCCAG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations