Genomic Feature

ya126

ID
ZDB-ALT-230316-4
Name
ya126
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Giraldez Lab
Current Source
Other Pages
Notes
Comment Citation
1.8kb deletion Zebrafish Nomenclature Committee
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 10: 39085352 - 39087131 (GRCz11) (1) Details
Nucleotide change
AGCGAGGTCGGTGGGGCGAGAGCAAATCTCCATTAATCAGCGTTGAATGAGTCGGTGTGCATGAAGGGGGCGGTGCGCGCAGCACTGCAATAAAAACGAGCGGAGCGAGCGAACAGAAGCAGGACATAAACAATGAGGAATTTCCTAAAGTACTTGTGGGATGTGTTTTTAAAAAGAAAGTATAACACACAACATACATTTAATTATATCTGAACGAACAGCTCGTATGATTAGATTCTTTTTAACACGCTGCATTTTCAGGGGTTGTTCAATACTAAGAGGAGCTGTTCATATGAGCCGATTCCTCTGAATGAATGCAGAGTGGAGATCTGTTCGCGAGCGATTGACTCATATGAGTCGGTTCGTTTCATAGTGAATCAAAACACTCGCGACTTGTACAGGTTTTAAAGAAAAAACTTTTCTGTGGATGTATTTTCATAATTATTCATATTATTAACTTCTACAGAGCACTTTATAAAACTATTTTATTTCGAAACCACAAGTTATTAACTTACTTGACTGAAAGTGAATCAAGTCTATCTGTTTTGTAACGTTAAAGACTCGCTATACATATGTATAGTTATTTATGCAAACTGTGGATACTATTAATTATTATTTTATTAAATGTAAGTACTTAATTAGATTTGGAACCACGTGTTTGCTTGTTATGATAACTAATCGCCTTATTTATAGTTAATTAAAGTTTATAATCACTAGTTGCAACATTTTTGTTTGTTTGTTTGTTTAATGCAATTGAAATAATCTGATTTAACTTAAAATGCATTTTCCAATAAATTAATAAGCATCCTTATAGTACTAACTGGTGTTATAAATATACAGTTATGTTATAACACTTAATTTTTTCTGCCCACAGGCGAACAATGACGCTGAAGTCTCTGAGGTAAGCAGATTTCACTATTTATAGTGTAGAAAAAAGTTTTAGAAATAAAAATATATATCAAACTGAATCAAAACATTTTAACTCCCTTATTGACTTACAGCCTAAAAGAAGGTCAGAGAGGTTGGTAAACGTGAGTATACTTTTTAAATGTATATAATTCACATATATTCAACAGCTATAGGAAGTATTCCCAGTTGTTTACATATTAATTGATGTGTTATTACTCTCTTCGTTTTCAGAAACCTGCACCCCCAAAGGCAGAGCCCAAGCCAAAGGTAAGAACTTGTTTAAAATAAAACTATAAAAGATGCATTTGATGAATGCACAGACTATAATTGAGCAAAATAACTGTACATTACAGAAGGCCCCTGCCAAACCTAAGAAAACAAAGGAACCCAAGGAGCCCAAGGAGGAGGAGAAGAAAGAGGAGGTGCCCGCAGAAAACGGAGAAACAAAAGCTGACGATGATGTAAGGGAGTTAACTTTGACGTAAATATTTCCCTAAATTAAATTTAAGGCTAACAATGATGCTTTCTTTCAGGCATCGGCAACAGAAGACGGCGACAAGAAAGAAGACGGGGAATAACTCTGCTGAGGTCTCATCTTTTACCAGCACTCCCTGTACCTCTTTTCTTGTACAATTCAGGGGAATATTTTTATCTACTATTTTCTAAAGGCAGGTTTTTTAGTAGTTTGATTGTAGAGACACATTTTTTATGGAAGAAAAAGAAACATTTTGAAAGTGACGTCATCATATCCAGCATTTTTACATTGGGCAGAAAACAAAAACTACCATCATCGTAAATGTTGACAGGCGTATTTTTTTTCCCCCTCCTCTCCATTCTTGCTTTCAAAGCAAGGTTTCGAGGTAGAGGGGTA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1780 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
AATCTTAGTTTTCGTTTATGTGCATCTTACAGTCTTTAAAACTAGAGGTTGTTGCGCGCTGGGCTGCGAATCAAATTGTTGCATTCAATGTGTAATTATTTATTTATTACATGCTCTATTTTACTTATCATTCTGAAAATGTTCATATATGTGTCTTTGTGAAGGCTCGGGGTTTTTTTTTAGTGTCATGGCTGCCCTTGCGCGCAACCCCGATGATTTAAACTCACTGTGGCTTTTCAATACATGGCGACAGACGGTGCGATATTTTATCCTGCAGCTCATAGTCATGCATGAGGGATTTAATTCGTGCATTGGGGCTTTAGTGCACGATTGGGTCTCGATACATTTGGTCGTGCAAACGTCGGATTATGCAATGGCGGTGTTCTTGCACAGTGTTTGGTGTTTCCTATTCTTCTGGTATATTCTGTGGTGTTTTTTTTTCCTCGCGGCTGTGCACGTCGGGATGTTGTGTTTGAAAGTGAATGGCGGGAATGTCATGG
AGCGAGGTCGGTGGGGCGAGAGCAAATCTCCATTAATCAGCGTTGAATGAGTCGGTGTGCATGAAGGGGGCGGTGCGCGCAGCACTGCAATAAAAACGAGCGGAGCGAGCGAACAGAAGCAGGACATAAACAATGAGGAATTTCCTAAAGTACTTGTGGGATGTGTTTTTAAAAAGAAAGTATAACACACAACATACATTTAATTATATCTGAACGAACAGCTCGTATGATTAGATTCTTTTTAACACGCTGCATTTTCAGGGGTTGTTCAATACTAAGAGGAGCTGTTCATATGAGCCGATTCCTCTGAATGAATGCAGAGTGGAGATCTGTTCGCGAGCGATTGACTCATATGAGTCGGTTCGTTTCATAGTGAATCAAAACACTCGCGACTTGTACAGGTTTTAAAGAAAAAACTTTTCTGTGGATGTATTTTCATAATTATTCATATTATTAACTTCTACAGAGCACTTTATAAAACTATTTTATTTCGAAACCACAAGTTATTAACTTACTTGACTGAAAGTGAATCAAGTCTATCTGTTTTGTAACGTTAAAGACTCGCTATACATATGTATAGTTATTTATGCAAACTGTGGATACTATTAATTATTATTTTATTAAATGTAAGTACTTAATTAGATTTGGAACCACGTGTTTGCTTGTTATGATAACTAATCGCCTTATTTATAGTTAATTAAAGTTTATAATCACTAGTTGCAACATTTTTGTTTGTTTGTTTGTTTAATGCAATTGAAATAATCTGATTTAACTTAAAATGCATTTTCCAATAAATTAATAAGCATCCTTATAGTACTAACTGGTGTTATAAATATACAGTTATGTTATAACACTTAATTTTTTCTGCCCACAGGCGAACAATGACGCTGAAGTCTCTGAGGTAAGCAGATTTCACTATTTATAGTGTAGAAAAAAGTTTTAGAAATAAAAATATATATCAAACTGAATCAAAACATTTTAACTCCCTTATTGACTTACAGCCTAAAAGAAGGTCAGAGAGGTTGGTAAACGTGAGTATACTTTTTAAATGTATATAATTCACATATATTCAACAGCTATAGGAAGTATTCCCAGTTGTTTACATATTAATTGATGTGTTATTACTCTCTTCGTTTTCAGAAACCTGCACCCCCAAAGGCAGAGCCCAAGCCAAAGGTAAGAACTTGTTTAAAATAAAACTATAAAAGATGCATTTGATGAATGCACAGACTATAATTGAGCAAAATAACTGTACATTACAGAAGGCCCCTGCCAAACCTAAGAAAACAAAGGAACCCAAGGAGCCCAAGGAGGAGGAGAAGAAAGAGGAGGTGCCCGCAGAAAACGGAGAAACAAAAGCTGACGATGATGTAAGGGAGTTAACTTTGACGTAAATATTTCCCTAAATTAAATTTAAGGCTAACAATGATGCTTTCTTTCAGGCATCGGCAACAGAAGACGGCGACAAGAAAGAAGACGGGGAATAACTCTGCTGAGGTCTCATCTTTTACCAGCACTCCCTGTACCTCTTTTCTTGTACAATTCAGGGGAATATTTTTATCTACTATTTTCTAAAGGCAGGTTTTTTAGTAGTTTGATTGTAGAGACACATTTTTTATGGAAGAAAAAGAAACATTTTGAAAGTGACGTCATCATATCCAGCATTTTTACATTGGGCAGAAAACAAAAACTACCATCATCGTAAATGTTGACAGGCGTATTTTTTTTCCCCCTCCTCTCCATTCTTGCTTTCAAAGCAAGGTTTCGAGGTAGAGGGGTA/- GGTTTTTTGGGCATGTCGTTTACACAGACAGCTGGACATCTTATCAAGCTTGTCCGAATGACTAACATTCCATTGGCTCT  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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