Genomic Feature

zf3539

ID
ZDB-ALT-221213-13
Name
zf3539
Synonyms
  • vstm2l E2 -13 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
Lab of Origin
Jiang Lab
Current Source
Other Pages
Notes
Comment Citation
Deletion of 13 bp Jiang et al., 2022
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 2128148 - 2128160 (GRCz11) (1) Details
Nucleotide change
CTCCGCCCATTGT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
13 bp deleted from position 2128148 to 2128160 in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACACTGATTTTAGTCGCCCCCTTTGATGCATTTTCCTGTGAAACCACCTGTAGACACAAAACAGCATTTAAAACCACAAACTAATTTATACTACAGCTAAATACATGCATACCAAATATCCAGTAGCCTGAACAAATACTGTAAAAAAAATACTTATTTTATTGCCATGTTAGCATCCAATGTTTTTTGTGGCAAAAAACAACAACTTCACACTAAACTTGATTTTTTACATTCTAACACACTACTTTTCCATTGCAGCATAAATCTTAATTTAGGTTTTTTTTACTTGTTCTTCATTAAAATAAAAAAATAATTCTTCTTTGGTACTTTTCATTTAAAAATAAATAAATATATAAACAATATTTTAAAATGTAATTATTTTTTTTATTAAAAATGCGAAAACCTTTTCTGGTAAAACTGCACCAAACAATTTGCATAAGGTAAAGAACAAATGATTATGCGAAAGTGTGTCTTTCCTGATTGGTTGCCCACGGCAATGG
CTCCGCCCATTGT/- CTGCTGTACCACCACTGGATCTCCAGTGAGACGGACGAGGAACTGGATCCTCTGAAGGAGCAGCTCATCTCCACATCTTCTCCGGCTCGAGAAAACACATCAGCGGGAACCTCCGTAAACAGAGCTGCAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAATAAAGTCAGCATGAGATCATATACACACATTTAAGTACACCATTTTCATATTAATATTGACATTACAAAATACGAACTGGAATTATTATTATTAATAAGTTAGAGCAGGGGTGTGAAACTCAATTCCTGCAGGGCCGAAGCCCTGCACAGTTTAGTTCCAACCCTGCTCTAACACACTTACCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATTAGTTTGATCAGGTGTGTTTAATTAGGGTT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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