Genomic Feature

zf3538

ID
ZDB-ALT-221213-12
Name
zf3538
Synonyms
  • vstm2l E2 -8 (1)
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Jiang Lab
Current Source
Other Pages
Notes
Comment Citation
Deletion of 8 bp Jiang et al., 2022
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 6: 2128150 - 2128157 (GRCz11) (1) Details
Nucleotide change
CCGCCCAT/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted from position 2128150 to 2128157 in Exon 2 (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
ACTGATTTTAGTCGCCCCCTTTGATGCATTTTCCTGTGAAACCACCTGTAGACACAAAACAGCATTTAAAACCACAAACTAATTTATACTACAGCTAAATACATGCATACCAAATATCCAGTAGCCTGAACAAATACTGTAAAAAAAATACTTATTTTATTGCCATGTTAGCATCCAATGTTTTTTGTGGCAAAAAACAACAACTTCACACTAAACTTGATTTTTTACATTCTAACACACTACTTTTCCATTGCAGCATAAATCTTAATTTAGGTTTTTTTTACTTGTTCTTCATTAAAATAAAAAAATAATTCTTCTTTGGTACTTTTCATTTAAAAATAAATAAATATATAAACAATATTTTAAAATGTAATTATTTTTTTTATTAAAAATGCGAAAACCTTTTCTGGTAAAACTGCACCAAACAATTTGCATAAGGTAAAGAACAAATGATTATGCGAAAGTGTGTCTTTCCTGATTGGTTGCCCACGGCAATGGCT
CCGCCCAT/- TGTCTGCTGTACCACCACTGGATCTCCAGTGAGACGGACGAGGAACTGGATCCTCTGAAGGAGCAGCTCATCTCCACATCTTCTCCGGCTCGAGAAAACACATCAGCGGGAACCTCCGTAAACAGAGCTGCAAACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACACAATAAAGTCAGCATGAGATCATATACACACATTTAAGTACACCATTTTCATATTAATATTGACATTACAAAATACGAACTGGAATTATTATTATTAATAAGTTAGAGCAGGGGTGTGAAACTCAATTCCTGCAGGGCCGAAGCCCTGCACAGTTTAGTTCCAACCCTGCTCTAACACACTTACCTGTAGGTTTCAAACAAGCCTGAAGGACTCAATTAGTTTGATCAGGTGTGTTTAATTAGG
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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