Genomic Feature

tud180

ID

ZDB-ALT-211202-4

Name

tud180

Synonyms

None

Affected Genomic Region

ism1 (1)

Construct

None

Type

Allele with one deletion (1)

Protocol

embryos treated with

Lab of Origin

Brand Lab

Current Source

Other Pages

Notes

No data available

Genome Browser

Variants

Variant Type: Small Deletion
Variant Location: Chr 13: 34779859 - 34779913 (GRCz11) (1) Details
Nucleotide change: TTGTCCCGGGACTCTGAGCCCAAGGCTGAGATGCTGGAATATGAGCCACCCGAGT/-
Variant Notes: None

Effect on DNA/cDNA, transcript, protein (from publications)

DNA/cDNA Change: 55 bp deleted (1)
Transcript Consequence: Premature Stop (1)
Protein Consequence: Polypeptide Truncation (1)

Sequences

Flanking Sequence: TTATTTTTAATGACTTCATTATTTTATTTTTGTCATGATGACTGTACACAATATTTTACTAGATAGTTTTTAAGACACTAGTATTTAGTTTAAAGTGCAATTTAAAAGCTTAACTAGGGGAACTAGGCAAAGTCATTGTAAAGCACTGGTTAGAATTATTAAATTTTTTTAAACAAATTTAAAAAAACTTTTATTTTTATGGCTTTTATTCTAGCCAAGATAAAACAAATATTATCAGAAATACTGCGACTTCTCTTGCTCCATTTAATATCACTTAAGAAATATTTGAAAAAGAATAAAGATTTTACAGGAGAGCTAATCATTTTGTTTTCAACTGTAATGTCATTCTGATATATAATATAATTACAAATATTGTAAGTGACTGTGAGCATCTACCTGTATATTGGGGTTCTGCCCATTTATATCTGCTTTGGAGAGATCAGGAAAGTTCTGCAGGTCCAGCAGGAAAGCTCCAGGGCCGTCTCGCTGCAGGCTGCCCC
TTGTCCCGGGACTCTGAGCCCAAGGCTGAGATGCTGGAATATGAGCCACCCGAGT/- CTGTCTGTCACCTGGCCCCAGCTGAACTGAGGAGCTGCTATCTGCATTCACATTATTCTGCATAACAGAAACAGTAGAAAGCCATTAGATTAGCATGTCTCTGCTTATGGAGCCACGTTTTAGCATTCGGTCACTTTGCTTACTCAATGGTTATTTACATTTTATCACTTTTTTTTATTTTTGCAAAGTTCACAGCAGTCCACTAAAAGGACAAACTTTTGGCTCAGTTCATTGTGAGCCTCCAGTTGGTCCACAGACAATCATGGATTTGAATTATTCTTAGAAAAGATGAATGTTCAAGAAAACAGATCCGAGTGAATCATCCCTCTGTGTACACTTCTTGACTCTCTGTTGTCACAAATTCAGAAATTCATCTCGGTTATTAGCTTGATTCCGTAAATACAGACGAGAACAATTAACATGCTCAAAATCTTCAGATTCATTATTTGTTGGCTAGAAAAAGTCTCACAATTTTATGTTATAATGATGATATTATTATA
Additional Sequence: None

Fish

Supplemental Information

Genotyping protocol: None

Citations