Genomic Feature

zf3119

ID
ZDB-ALT-200929-1
Name
zf3119
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Charnay Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 12: 8498394 - 8499504 (GRCz11) (1) Details
Nucleotide change
CTATACTCTTGGTTGAGGGTGAGTAAACTAACAACTATTTATTTTTGGTGAACTACGCCTTTAAAGGGGATAACTGTCTCATTGACATCCGAAGTTTCTGATAGTGTACATAATGCATTATGGATCTTTCATATTCATAGCTGCACTAATAAGATCACAGCTGCTATAATATGAACTTTACTATTACTAAGTGTTCAATTGTCACTGTAAGACAGCTCCAGAAGAAAGCTCAGCTCGACACACAAAAGCTCTCAATTTTGCACAGAACAGCGACAATCTTTGCCACTGACTGGCGCATCTGAATGCTTCACATTTTCAGGGATTCTTGCGTCCTCCCCCACAAATGAAAGAAGGAAACTTCTTCAGATGCATGTGTCTTTTGTTGTACGCCTACAGATGCAAAAATGTTTGCACACTGTGCAGAAGCGGCCCGCTTTGGCAGAGCGTGCCGGGCCCGCCGAATGCCCATTGGCAGCTGGGATCTGGCTGTCCCTGCTGGGAATGATGGTCTCAATGTAATGGACTCCCACACATGGCAGCCACTGAATTCAAGAGCTTTCTTTCTTGCATGTGCTCGAGGTCTCGAGAGGTCAAATGACTTCTGCACATTGAGGATACATAGAATGACATCCTTCTGCATCAGCCTTTGCATTGTTTTTCCTCTCTGTTTCATTGTTCTCTATTACTCATCAAGTTGGCTGTGAGATCGGCACACACAGCAAAAGGCAAAATCAGACAACTGTACTCACAAATTAAGTAAATAGGTCAGTTTACAACCTTTATCTTTATTACAGGTTACTTAATTTGTCAAATAATTTCTAGGCACATAATTTGCGAAATTTAGGCTGTGTACACTGTAAAAAAAAAGACAATCAACATTGTCTTATTCATGGATTACATTACTCAAAAAAAAAAAAAAAAAACTACATAGAATCTAACAAAATATCTCAGCTCTTTGGGTCAAATGTAATTCACTAGCTGCTGATCTACCTCAATTTTTTGAATTGGGATTTTTGAAGTGCTTTCTGAAATGTTTAAGCTGCAATTACTGCCAAACCCAATGCTTATAATTCTGGGATTTTCTGAAGCATTTGTTGTCAAACACACAAAA/-
Variant Notes
None
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
1111 bp deleted (1)
Transcript Consequence
None
Protein Consequence
None
Sequences
Flanking Sequence
TTGTGTTGAAAATTATTTTATATGTGAGCATGGACCACAACTTACATTACATCAGGATATTTATGGCAATTGTACATGAGTCAAAATTATAGATATTTCTGTTATACCAAAAATCTTTAGAATATTAAGTAAAAATCATATTCACTTAAGATAAGTAAGTAAATTAGTAAGCAAATAAGTAAATTCTGAACTGTATATTTATCAAAAAGCAATTTTTGATAATTAATTCAGATTCTCATTTATTCATTCATTTTCTTGTCGGCTTAGTCCCTTTATTAATCTGGGGTCGCCACAGCGGAATGAACCGCCATTCCAGCACGTTTTTACGCAGCGGATGCCCTTCCAGCCGCAACCCATCTCTGGGAAATAATTCAGATTCTATATGTTTTTTTAAAAAAGTTATGTTGATTTATTTTTTTTGTTTCTGTTTCTTACATTTCATAAATCCCCAAAGACCACACTTGCAGCTAAAAGGTTCAACTACTGAAGTAGAAATTCAC
CTATACTCTTGGTTGAGGGTGAGTAAACTAACAACTATTTATTTTTGGTGAACTACGCCTTTAAAGGGGATAACTGTCTCATTGACATCCGAAGTTTCTGATAGTGTACATAATGCATTATGGATCTTTCATATTCATAGCTGCACTAATAAGATCACAGCTGCTATAATATGAACTTTACTATTACTAAGTGTTCAATTGTCACTGTAAGACAGCTCCAGAAGAAAGCTCAGCTCGACACACAAAAGCTCTCAATTTTGCACAGAACAGCGACAATCTTTGCCACTGACTGGCGCATCTGAATGCTTCACATTTTCAGGGATTCTTGCGTCCTCCCCCACAAATGAAAGAAGGAAACTTCTTCAGATGCATGTGTCTTTTGTTGTACGCCTACAGATGCAAAAATGTTTGCACACTGTGCAGAAGCGGCCCGCTTTGGCAGAGCGTGCCGGGCCCGCCGAATGCCCATTGGCAGCTGGGATCTGGCTGTCCCTGCTGGGAATGATGGTCTCAATGTAATGGACTCCCACACATGGCAGCCACTGAATTCAAGAGCTTTCTTTCTTGCATGTGCTCGAGGTCTCGAGAGGTCAAATGACTTCTGCACATTGAGGATACATAGAATGACATCCTTCTGCATCAGCCTTTGCATTGTTTTTCCTCTCTGTTTCATTGTTCTCTATTACTCATCAAGTTGGCTGTGAGATCGGCACACACAGCAAAAGGCAAAATCAGACAACTGTACTCACAAATTAAGTAAATAGGTCAGTTTACAACCTTTATCTTTATTACAGGTTACTTAATTTGTCAAATAATTTCTAGGCACATAATTTGCGAAATTTAGGCTGTGTACACTGTAAAAAAAAAGACAATCAACATTGTCTTATTCATGGATTACATTACTCAAAAAAAAAAAAAAAAAACTACATAGAATCTAACAAAATATCTCAGCTCTTTGGGTCAAATGTAATTCACTAGCTGCTGATCTACCTCAATTTTTTGAATTGGGATTTTTGAAGTGCTTTCTGAAATGTTTAAGCTGCAATTACTGCCAAACCCAATGCTTATAATTCTGGGATTTTCTGAAGCATTTGTTGTCAAACACACAAAA/- CAAACTGCTCTCATGCAGCTTAACTATGGAGCCAGATCACTCTCAAAAATATAACATTTCACAATTTACATTTACAATAC  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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