Genomic Feature
zf3114
- ID
- ZDB-ALT-200928-10
- Name
- zf3114
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Charnay Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
|
This line was created using 2 CRISPRS: - 5'-GGAGAGACAATTTTTTTATG-3' This ... |
Torbey et al., 2018 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 12: 8559687 - 8561114 (GRCz11) (1) Details
- Nucleotide change
- TAATGCTCTAGAGCAGTGGCTCTCAAACTTTTTTCATCAAGTACCACCTCATAAAAAAATTGTCTCTCCACGTACCACCAAAATGAGCAGTATTGAAATACAATAGCGTAGTAGGCCCAGTAAAGCAGCTACAACTCTGCACAGTTTAAAAAACGTGGCAAATTACCTCAGAAATATAGGCTATATGTCATATATGGCATATTATATACATCATTTTTGATACATTTTAAAATGTGTGTAGCATGTACAAAACATATTTCATTCTTCCACTTACCACTAGAAGGAAGCCTGCGTACCACAGTTTGAGAACCACTGCTCTAGAGTAATTTTCAAGACACGATTCCAATCCACTCCAAACCAGTTTCTGTGTGAAAGCCTCACACCTGACAGCGGTGAGATCTGTCTGCTAGTTTAACATGTGTAAGAATATTTGTCAGGCACATTAGCTCACCGCAGGGTTCCCATTGTGTCCCCCGAGGAGGCCTTAAAAAATCCCCCCTCACATCCCCGTTGGCTCTTTTAGGGCGCTGTGTGTAGGAGGATATGTGGGATTCCCCATACAAGCGCTCCAAAAGCACACAGGAGAACCTGGACAGAAGACCCGCTGTAAGCAGAATGTCTGGAGTCGGGACTCTCCTCTATAGCTTGGCTGGCTCATCATTACTTTTGAGGGCCGAATCGAGGCAGGTGGAAGAGGCGACGGCTCGTCCTCCTACACGCAGATTCCAGTGGACGTCAAGCTCTCGTTTTCTCACAGCTGTCGACTGCTGATGTGCTGACAGAAGAAGAGCTGGAGATGAACACACACACACACACAGGAGAGAAGAATAGCTTAGTACTGACTTGATGCTGTGCGCTCAAATGATTTTAGCTGCTTGTCGAAATTACTTATTTAAAATGAGCTGAAACAACACAATTCTGGAGGTGTTTTTGGTGGAGACCTAATTGTTTTACTCTGCATTTTTATACTGTGTGCTGCACTCTAACATAATCATTAAGTAAGTTAACTATTTTTTTCCAATTTAAATGGATTAAACTTTTTAAAAAAATAAGTTGTCCCCCGCCCCCAACACCCCCCCCCCTCTCTCAAAAAAAAACAAGAAATGTGTTGTTTCCAACATAGGCTCTTTAAAGAGTGTACTATCTCAGTATACCGTCTTCTTGTCAGAGAAAATAAATATAAAAATAAATTGTAGTAATGTGTGAAGGTATTGGTCACCTACACTGTAAAAATGCAGGGTTCCACACAATTCCCAACACAAACTGATTAAGTTAACTTAAAACTTTTAACAAATTTATGTGGATTAAACAGAAAAAAATAAGTTGTCCCAATTAAATCTCAAGAATTCTGTTGTTTCAGCTCATTTTAAAGAAATAGTTTGAATGAGCAAAAAAAAAAGTTTTTTTTGAGTGGAACAGTTTTTGTTG/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1428 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TACATACATATATATATATATATATATATATATATATATATATATGTATATATGTATATATATGTATATATATATATATATATATATATATATATATATATATATATATATATATATGTATATATATATATATATATGTATGTATATGTGTGTGTGTGTGTGTGTGTGGGAAGCAAATTATAGATAAATTTTGTAAAACAATTCTTATATTATCCTTATTTTTTTAATTCAACTATAGGGGTGCAGCCGAGTAAGGAGCCTTAGAAGATAATGTGCCCAGGGGCCACTGAGTTCTAAATCCGGGCCTGCTTCCTGTCCTTCATCTGAGCTTTTAGGTTGTCACGAAAAAAACTCTTTATGTGAATGAAGAAAAAACTTAATTATGTGAATTTAGCTCATTTCATATAATTAGTTTGAACAAGCAGCAAAATCCTTTCTTTTGAGTGTGTACAAGTAAATAATGAGCAAATAATTGCAGAAATGTGTGTGAACTATCCCTT
TAATGCTCTAGAGCAGTGGCTCTCAAACTTTTTTCATCAAGTACCACCTCATAAAAAAATTGTCTCTCCACGTACCACCAAAATGAGCAGTATTGAAATACAATAGCGTAGTAGGCCCAGTAAAGCAGCTACAACTCTGCACAGTTTAAAAAACGTGGCAAATTACCTCAGAAATATAGGCTATATGTCATATATGGCATATTATATACATCATTTTTGATACATTTTAAAATGTGTGTAGCATGTACAAAACATATTTCATTCTTCCACTTACCACTAGAAGGAAGCCTGCGTACCACAGTTTGAGAACCACTGCTCTAGAGTAATTTTCAAGACACGATTCCAATCCACTCCAAACCAGTTTCTGTGTGAAAGCCTCACACCTGACAGCGGTGAGATCTGTCTGCTAGTTTAACATGTGTAAGAATATTTGTCAGGCACATTAGCTCACCGCAGGGTTCCCATTGTGTCCCCCGAGGAGGCCTTAAAAAATCCCCCCTCACATCCCCGTTGGCTCTTTTAGGGCGCTGTGTGTAGGAGGATATGTGGGATTCCCCATACAAGCGCTCCAAAAGCACACAGGAGAACCTGGACAGAAGACCCGCTGTAAGCAGAATGTCTGGAGTCGGGACTCTCCTCTATAGCTTGGCTGGCTCATCATTACTTTTGAGGGCCGAATCGAGGCAGGTGGAAGAGGCGACGGCTCGTCCTCCTACACGCAGATTCCAGTGGACGTCAAGCTCTCGTTTTCTCACAGCTGTCGACTGCTGATGTGCTGACAGAAGAAGAGCTGGAGATGAACACACACACACACACAGGAGAGAAGAATAGCTTAGTACTGACTTGATGCTGTGCGCTCAAATGATTTTAGCTGCTTGTCGAAATTACTTATTTAAAATGAGCTGAAACAACACAATTCTGGAGGTGTTTTTGGTGGAGACCTAATTGTTTTACTCTGCATTTTTATACTGTGTGCTGCACTCTAACATAATCATTAAGTAAGTTAACTATTTTTTTCCAATTTAAATGGATTAAACTTTTTAAAAAAATAAGTTGTCCCCCGCCCCCAACACCCCCCCCCCTCTCTCAAAAAAAAACAAGAAATGTGTTGTTTCCAACATAGGCTCTTTAAAGAGTGTACTATCTCAGTATACCGTCTTCTTGTCAGAGAAAATAAATATAAAAATAAATTGTAGTAATGTGTGAAGGTATTGGTCACCTACACTGTAAAAATGCAGGGTTCCACACAATTCCCAACACAAACTGATTAAGTTAACTTAAAACTTTTAACAAATTTATGTGGATTAAACAGAAAAAAATAAGTTGTCCCAATTAAATCTCAAGAATTCTGTTGTTTCAGCTCATTTTAAAGAAATAGTTTGAATGAGCAAAAAAAAAAGTTTTTTTTGAGTGGAACAGTTTTTGTTG/- GGTACATTTAAAAAAATATATATTCTTACGGCCACAACTGCATTGTGGATACATCGGTGCCGCTTTAGAGGCGTTGCTCG ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None