Genomic Feature
a368
- ID
- ZDB-ALT-200122-3
- Name
- a368
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Schier Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 2: 20145551 - 20146115 (GRCz11) (1) Details
- Nucleotide change
- AGCAGCACTTTGCCAATGTAGGTGGAGACACTACACAGAGAGCAAGAGCAGCCTGTCTTCTGTTGCAGAAATCAAACAAACCACGGTGAAGAGTGATTAGCTGTCTAGTTGCTACATAAACGGCCACAGTGCAAAGCCAGAAGGTTTTTCGGGACCAGTGGAGGTTATCTCCCCGAAGACAGTCGACAATGACTCTCCTCAACTACGCGTATTCTTAAGCAATAACAACGAGAGCCGTATTATCCACCCAAGAATACCCGTCACCGAAGAGAGCCTCAGAAAAAAAAGGGGGTGGGGGGCTTCGCCTGACTTTCAGCCATCCACAGTGGCATAGGCCAAAACAGAGTTTTCTCTCTAGGGGAATTGATTGAAGATGCCCTTTACCATAAGGCAAGGCCCCCGTCAAAGGTTGCATCTGCAGACAGAAATGAACACACTTTGCATTTGTAGCAGGAGAGGGTGGATATTGCATGTACAAATAAAAAAAGCGCTTCCCTTCCTGGGTTTAACTAGTAATGTGGAGAGACAGATGGTGAGGGGGATCATCTTACCTGAGAGAGGGTGC/-
- Variant Notes
-
~200bpD, entire microRNA removed
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 200 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
TTAGTGGTTTGAAAAAGAACATTATGTGTATGTGTGTCTTTATCTAGGAGAAGAAAAAATAATCAATTTGTTTTTGTCCAGAATGAACCAGCTGATGCTACGAGCCTGGTTCGCATTCATATTATGCTGCGTTTTGTAATTAGAATGAGTCCCTCCCATTTCATAACAAAGCCTCTTTAGATTCCCTGAACATTTTGCCTCCCATTGCTGTCAGCTGAATGGCGAAAACTGTACGCGTAATGCCATCTCAAAATCAATCTGTGTGAACACCCCATGCAGTCCAGGGCTCCCGCTGGTGCTCAGGACTAACAATAAAGAGCAGTAAATGCATTCCTATCAGCCAGGCAAGTAGGCATGTGTACGCTAAAACACTCCCCGAAGAGAGCACAAATAAACGCCATTCTCCATGCGCGCACAGGGGGAAAAAAATACATAAATAAATAAAAAAACAAGTTGTGTGAAATGCAAAATGCTGCTTGTTGAATTGCAGCAGTACATAA
AGCAGCACTTTGCCAATGTAGGTGGAGACACTACACAGAGAGCAAGAGCAGCCTGTCTTCTGTTGCAGAAATCAAACAAACCACGGTGAAGAGTGATTAGCTGTCTAGTTGCTACATAAACGGCCACAGTGCAAAGCCAGAAGGTTTTTCGGGACCAGTGGAGGTTATCTCCCCGAAGACAGTCGACAATGACTCTCCTCAACTACGCGTATTCTTAAGCAATAACAACGAGAGCCGTATTATCCACCCAAGAATACCCGTCACCGAAGAGAGCCTCAGAAAAAAAAGGGGGTGGGGGGCTTCGCCTGACTTTCAGCCATCCACAGTGGCATAGGCCAAAACAGAGTTTTCTCTCTAGGGGAATTGATTGAAGATGCCCTTTACCATAAGGCAAGGCCCCCGTCAAAGGTTGCATCTGCAGACAGAAATGAACACACTTTGCATTTGTAGCAGGAGAGGGTGGATATTGCATGTACAAATAAAAAAAGCGCTTCCCTTCCTGGGTTTAACTAGTAATGTGGAGAGACAGATGGTGAGGGGGATCATCTTACCTGAGAGAGGGTGC/- TCACGGAGCTCGCGCCCTGTCCTCGGTCCAGCCCGGCCTCTGGGGGCGGAAGTGCTCGCAGGCCAAATCTGGGAACGATG ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None