Genomic Feature
uva6
- ID
- ZDB-ALT-200116-3
- Name
- uva6
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Kucenas Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 21: 13302010 - 13302061 (GRCz11) (1) Details
- Nucleotide change
- TTTGTGGTGTCGCTGGCCGTGGCGGACATTGCAGTCGGAGTCCTGGCCATTC/-
- Variant Notes
-
This allele lacks all conserved ligand binding
domains and C-terminal signaling.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 52 bp deleted in Exon 2 (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
GTGATATTATTGTTCTTTCTACAGAGAAAGAAGTGCCAGGGAACGTCTACGGGAGTCGATTCATGCAGTCTAGCAGCTGTTTCCTTTACGACTCTGAATGAAAGCCGTTGTGAGCTGGACCTAAGGGACAGTCCGGTAAACGGGTAAATCAAGGTTTGCGAAAGTGTGTCTGCGCAGACCCTCCACTTACTGTAGTGACTCCCAAAGTGTATTTTCTACCACATCATTCCCTTCAAACTCAGGCGGAATGGTTGGGCTGGCTAGTCCTCACACCTACTGCAAGAGCTATTGAGTGGCGGAGTGAGGTCCCACTGAGCAATTATCGGGAGCACAACTATGTGTGTCCCTGAGGATATCCTTTCACACTGGTTGATAGCACCATGTCTTCTCTCGTCTACATTGTTCTTGAACTGGTGATTGCGGTTTTGGCCGTGGCTGGAAATGTTTTGGTGTGCTGGGCCGTCTGCCTCAACAGCAACCTTCAGAGCATCACTAACTTC
TTTGTGGTGTCGCTGGCCGTGGCGGACATTGCAGTCGGAGTCCTGGCCATTC/- CATTTGCCGTCACCATCAGCATCGGCTTCTGCAGCAATTTTCATGGATGCCTCTTCATCGCTTGCTTTGTGCTGGTCCTCACGCAGAGCTCCGTCTTCAGTTTGTTGGCCATTGCCGTGGATCGATACATCGCCATCAAGATCCCATTGAGGTGAGTGAACAGCCGTGTATTGGTTGAAGGCAGACATTTTATAAGAGGATTAATGATCACATGGTAACTTGAAAGAGCAGATTGTTTTGCCCAACAGCAAAACATACAGTTTTTCTCATTTGAAATACCAGCACATTCTGGTTATTATTTGTTGTGAAAAATACATCAAAATTAAGACTGAAAACCAAACTGAAATTTAGTCTTTCTTTTTGTCAAGGCAATAGCTCACAGGGGTCAAATTAAATGTGTTTTTTAAATTCAGCCCATATTCCCATATATAAATCTGATACATGTAAATGTAAATATATGTAAGTTGCATGGATGATATGCAACTTTGGATTTTAAATAT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None