Genomic Feature
udm102
- ID
- ZDB-ALT-190107-2
- Name
- udm102
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Pierre Drapeau Lab
- Current Source
- Other Pages
Notes
| Comment | Citation |
|---|---|
| Homozygous larvae typically die between 10 and 14 dpf. If separated early and ... | Swaminathan et al., 2018 |
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 10: 17213911 - 17213914 (GRCz11) (1) Details
- Nucleotide change
- AATC/-
- Variant Notes
- None
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 4 bp deleted in Exon 14 (1)
- Transcript Consequence
- Frameshift (1)
- Protein Consequence
- Polypeptide Truncation: 1216 AA missing (1)
- Flanking Sequence
-
CATCCGCTGTGTAAAATATATGCTGGAAAAGTTGGCGGTTCATTCCACTGTGGTGACCCCTGATGAATAAAGGGACAACGCTGAAGGTAAATGAAGGAATGAAACCAAATTTTTTTTTTTTTATGTGAAAAGTCCCATCCCTAATTATAACTAATCGCACATAACTTACTAAAGAGAAAATGATAAATGCTGGACAAGGATCTTTCTTTAACACATGCGCTTGCAAACACCATCAAATAGCTATTTGTTTACAAAGGCAGTTCATTAAATCATGTGGCTAAAAACAAAGTACATTTTGGGCTTTAATGTGAAGTACACTAACCTTGAAGAGTGGAACAGCGTGAAGGGGCTGTTCTCCCATACACACCAGATCAACACCAATGCCTATCAGAAACATACCATTTCATCAGCATTAACCTCAAGAAATAAGATCAGCAGTGTCTGAAGTGCACGCTCACTGACCGTTGTCAATCATGCGCTGTTTGGTGAGGATCATGAGC
AATC/- GGTCGACTTCAAAAACACCCACTCCTGGAGTTATGACCACTGACATTTGACCAGTGCGGTCAAAGTTACGGTTGATGTAGTGCTTATCAAACACTAAAAGAGACAAACAGGACACCGATCATGCAATAACAGCTCTACTGAAGAATGTAAACTAAATACACAAAAACAAACCATTGAAAGACAAGTTGATTGCTTCCAGGTAATTTCCTTGAGCAGAAGTGGAGTTGTGTCCACATGGAAATCCATCTGTAATATTGATGTAAATGTGTAAGTCTTGGTAATAAAGTCTTGGAATTTTTAAATAATCAAGTAACAATGGAATAAATTGCTATGGTGTTCATCATTCAAAAGTAAAATTACTTAGTTAAAAGTTAAAGACTGTAAATAAATACTCTAAGTGAGGATGCATAAAATTAGTAATAAAAGTGGCTGAGAGATTTTTAATGTGACAAAATATTTCTCTTTAACAAAATTTGTATACAGCAAAGAATCCTGCTTAC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None