Genomic Feature

wz09

ID
ZDB-ALT-180904-3
Name
wz09
Synonyms
  • cnga2a-del (1)
Affected Genomic Region
Construct
None
Type
Allele with one delins (1)
Protocol
embryos treated with
Lab of Origin
Levkowitz Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Delins
Variant Location
Chr 14: 13842639 - 13843241 (GRCz11) (1) Details
Nucleotide change
ATTTTCTAGTTGGGGTTTTAATTTTTGCAACCATTGTTGGTAATGTTGGAGCAATGATCTCCAACATGAATGCCACTCGTGCTGAATTTCAAGGTCAGATTGATGCCATTAAACATTACATGAAGTTCCGAAAGGTTAGCAAAGAGCTGGAAGCTAGAGTCATCAAATGGTTTGACTATTTGTGGACAAATAAGAAAACAATTGATGAGCAGGATGTCCTAAAAAATCTACCAAACAAACTTCGGGCTGAAATTGCTATTAATGTGCACTTAGAAACATTGAAGAAGGTTCGTATTTTCCAGGACTGTGAGGCGGGGCTTTTGGTGGAACTTGTTCTTAAGCTGCGGCCACAGGTCTTTAGTCCAGGAGACTACATCTGCAGAAAGGGAGACATAGGAAAAGAGATGTATATCATCAAAGAGGGTTGCCTTGCTGTTGTGGCTGATGATGGGGTGACCCAGTATGCACACTTAACTGCTGGAAGCTGTTTTGGTGAAATTAGCATCCTAAACATAAGAGGAAGCAAAATGGGCAATCGTCGCACTGCTAACATCAGAAGTATTGGCTACTCTGATCTCTTTTGTTTGTCAAAAGGTGACCTGA/TTT
Variant Notes
In-frame deletion of nucleotides coding for amino acids 360 to 561.
Two CRISPR sequences were used to generate this mutation: CRISPR1-cnga2a and  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
in RefSeq:NM_001044746 (1)
Transcript Consequence
None
Protein Consequence
Amino Acid Deletion: from position 360 to 561 (1)
Sequences
Flanking Sequence
ATGACAATGTTTCTTCACTACAGGTTTCCTTGAACAAGGTCTTCTGGTGAAGGACCTAATCAAATTAAGAGAAAGCTACTTTCATACTCTACAGTTCAAGCTTGACTTGCTATCAATAATACCCACAGATTTAGGTTACATCGTCATTGGCATTCATGTACCAGAGCTTCGTTTGAATAGACTTATGCGCTTCTCACGCCTGTTCGAATTCTTTGACCGTACAGAGACCCGCACCAGCTACCCCAACTTGTTCCGTATTTGCAACTTGGTGCTCTATATTCTAGTAATTATTCACTGGAATGCTTGCATCTACTTTGCTATCTCCAAATCTCTGGGTTTTGGATCCGATCAATGGGTCTACCCAAACATCTCTGACCCTAAGTTTGGGACACTCACACGAGGATACGTGTACTGCCTTTACTGGTCAACCCTCACATTGACAACCATCGGGGAAATGCCAGCTCCAGTCCAGGATGAGGAGTATCTTTTTGTTGTTTTTG
ATTTTCTAGTTGGGGTTTTAATTTTTGCAACCATTGTTGGTAATGTTGGAGCAATGATCTCCAACATGAATGCCACTCGTGCTGAATTTCAAGGTCAGATTGATGCCATTAAACATTACATGAAGTTCCGAAAGGTTAGCAAAGAGCTGGAAGCTAGAGTCATCAAATGGTTTGACTATTTGTGGACAAATAAGAAAACAATTGATGAGCAGGATGTCCTAAAAAATCTACCAAACAAACTTCGGGCTGAAATTGCTATTAATGTGCACTTAGAAACATTGAAGAAGGTTCGTATTTTCCAGGACTGTGAGGCGGGGCTTTTGGTGGAACTTGTTCTTAAGCTGCGGCCACAGGTCTTTAGTCCAGGAGACTACATCTGCAGAAAGGGAGACATAGGAAAAGAGATGTATATCATCAAAGAGGGTTGCCTTGCTGTTGTGGCTGATGATGGGGTGACCCAGTATGCACACTTAACTGCTGGAAGCTGTTTTGGTGAAATTAGCATCCTAAACATAAGAGGAAGCAAAATGGGCAATCGTCGCACTGCTAACATCAGAAGTATTGGCTACTCTGATCTCTTTTGTTTGTCAAAAGGTGACCTGA/TTT TGGAGGCTGTAATGGAGTATCCAGATGCTAAGAAAGTTCTGGAAGAGAAGGGAAGACAAATTCTTATAAAAGAGGGTTTG  ...
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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