Genomic Feature

bns90

ID
ZDB-ALT-171002-11
Name
bns90
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
embryos treated with
Lab of Origin
Stainier Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 20: 20337166 - 20337173 (GRCz11) (1) Details
Nucleotide change
TCGAGGGA/-
Variant Notes
Allele contains an indel mutation (−8) in the first PAS domain (exon6) leading  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
8 bp deleted in Exon 6 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
AGTTTGAGATTTAGTAAATAGTTATTACCATACTTGCATACATACATGAAAACGTTTATTCATAATTAGTAGAACCTTAAAATACACTAATAGCTTCTGCCACTAGGTGGTGCTAACAACCCAGTAAAGTTAAAACCGCAGGCTTTTGTGCTGACACTAAACGGGTTCTGCAGCATTGCTTTTATTCAAAGAGATGTAAACAAAAAGATTCAGGCTTGCAAAACATTTGTTGCCAAGCACAGATAACACTGTACATCCTGTACATCCAAACAAAACCCCAATGAAAATGAAAAAAGGAAAACTAAATTGTGCTAAATAATTTAAACCCTCAGAAAATGAAGAAAAAGAAAGGTTTGTGTGCCAATGTGTCGACCACCAAATTGGATTTTCTAATATGAGGGAGTCACATCTCTCTGCTAACCTTTCATCACAGTATGAGAACTTCATGTCCAGAGTGTGGCGGCTGAGGAAGGTCTTGCTGTCCAATGGCACCTCGATGT
TCGAGGGA/- TGAGGAATGGGCTCACAGATGAGCACAAGGTAAGTGACAGGGGGCTCTTTAAAGCCAGAGTCTTCTGAAGCCTCGCTGCCCTCGTGCACACGAACATGACCAGCGCAGTGAAGAACCTGAGAGAAGGAAAAATCTGCTTGTAAAAGTCTACTTTGAGCAAGTCAGCTACAATCAGTGTTCTTGCATCTCTTTCAAAGTAGAATTTAAGCACTTTATAAGTATGGCAAATGAGATATTTACAGAAATATACATAATTTATCACATCATAGCAGATGTTATTTGGTAAAGTATTCAACATTATAGTATTCTAAGGAACATTTTGATGGCATGTTTGCCGCAACATTGAATTACTGTAATTTACTCCTGTACATTTTTACTCACATCTTAATTGTGTCTTAATTTGAATTTCAAAAGGCACAGATGAAAAAAAAAAACTTTACAGGCACATAAGCAAACTCTAGAGTTTTAATTTTAGGCAAACGCAAAAAGATTTATTTTAT
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations