Genomic Feature
nju49
- ID
- ZDB-ALT-170113-7
- Name
- nju49
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Zhao Lab
- Current Source
- China Zebrafish Resource Center (CZRC) ( order this )
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 25: 25506480 - 25506586 (GRCz11) (1) Details
- Nucleotide change
- AAGCTGGTTAGCCGCTGTCACACGCACAGTGGAGTGGAGAATAGGCGCAATGTGCGTTAGTCAGTGGCTTACCTGCTTTCAGAAATCACAAGTTCCGATGGCACAGG/-
- Variant Notes
-
As compared to the WT sequence, 107 bp is deleted (contain all exon 1)
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 107 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
AAAAAAATCTGTCACACGAATAAAACAATGATATATGATTCGAGGTTAAACTTTTAAAGTGACACTTCGACAGCCTCTGTAATTTGCGTAGCTTGAAGTTCAAAAGTTCAGAGTTGGTTTCGTGAAAAACAACATTATTGTACAAACAAGACGAAGCAAAGCAACTTAGTCAACAAGTTTAATCCTTTGTGAACCAGACTGCACATGATCACATTTACACTGTATTTCTAGTGACACTGTAAGCAGGCTATTTTCTTAAAAATGTACATGTACACCGATCACACAACGCACCCATTTATTCAGGGCATGCGCTCCGCGGGGATTGAACGCACCACAGCCCTAAGTTAGTGTTTCAAGTGCAGTGCTTTACCAAGAACAAAAAGTCATGTTAGAGGGACAGTGGATCCCAAAGCGTCCCTCCGGTGACTGTGTCCGCCTTGATCCTTTAAGTAGTCTCCAGTGGGACATTCCCACGGCGCTGATGTCAGGTGCAGATCCAA
AAGCTGGTTAGCCGCTGTCACACGCACAGTGGAGTGGAGAATAGGCGCAATGTGCGTTAGTCAGTGGCTTACCTGCTTTCAGAAATCACAAGTTCCGATGGCACAGG/- AAACGGTGGAAACCCAGAATATCGCTGTAAACATGTGAATAAAAATTATCATTTTTTATAACATGCCGTTCTGCAGCTGAACATTAGCAAAATATAATGTAGCCTACAAGGATAATTTATTGTAATATTTATAATACATTTTAATAATACGATTATATTTTAATATATGATGACGATATAATATTTAAGATAGTTAGGCCTTTATAAAGTGATAACTTATATTCAGCGATCATGTATGGATAAAATGTCTTAATATCCATTAAATAAAATTATTTACTCATCCTGAAATTACTATGGTCTCTCTCTCACATATACACGCATACATATATGGTATATATGGGCTAATATGAGCAAATATATCGATTTATACAAAAAAGTAAATAAGAAAATAATAAGATATTTAGAGATAACACTATGCAAGCATATATGTATATACATTTTTTAAATCAACTGATTAATAATATTTGACAGTAAAAAAAGAAGCAAAGAAAAAACACACT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None