Genomic Feature
um158
- ID
- ZDB-ALT-160721-16
- Name
- um158
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- embryos treated with
- Lab of Origin
- Lawson Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 17: 22686841 - 22690046 (GRCz11) (1) Details
- Nucleotide change
- ATTTCTACCTCTGTCTATCACATGTGACAGGAAACTGACCTCTGCATTCTCAGAGGGTTTAAAAACTCCTCCATCACCACTGGTACAGACAGATTAAAATAGAGAAGCAAAATCATCTCTACCTCAGCTACCACATCCTCTGTTTTTCCCACTCTAGTTTTTTGTAACTGTAAACTGCTTGTCTTTATTGTGCACTGAACTCTACTAGTATTCAAAAACCACCCAAATGCATGACTCACACTCATAGATGTGCAGAACAGCACATACAAGCTTGGTCTTCTTCAAACAGGAGCATTTGATACGGCTAAAACATGCACATCATTCACGAGCTCCTGATCCATAGAATATTATTTTATTGATCAGATTATCTATGGCACAGTACATCTAGTATGTAATCATGTATCAATACAAAAGCATTTTCCTTTGCACAGAAACAACGTGTCTGACACTGCACTCAAATCAGAGAGAAAACACACACACACGCACACTCATTATTTGTCTGTTTATCCTCCCTGCTGTCAGAAAGGAGGAACTGTAGTGAAAAAGTGTCCAAATATCTGCGAACTGCCTGTTCCCATAAGGTCCAGAATTTGAAAACTGCAGATGGGTTTCAGAGTCTATCATTCTTCTCTGTTAATTCTCTCTTAATAGAAAAATATTTCATACTTCCCGTTTTTCCATTTTATTGCAGATTTTTTTTTCAATTGGTGGGCAAATTCTGAAGGAGATGTTCTGTTGCCCTGTGACGTTCTTGTTTGTCCAGTAGGGTCTTTCCCTATGTGCATCCTTATAATCACAGCCAGGCAGTGCTCGATGTAATTTCAGTTGCTGGGGAAACATACTGTCCTTTGGCTGGTGACCACATCCTGCAAGGATGCAAATCAGGTGTATCCATGATTCGTTCTCTTTATGTCCAGAGATCTGTTTTGAACTGACATCCATTGCGTTTGTGTATATCCGAATAGGTCAGAGGTCAAAGAGTAAGCGTCACTGTCTCTGACTGACGCTGCCCAGTGTCATCTTCCACCATCTTCTCTGTAAGACATCAACCCTGCTGTCATATCTTCGTCGGACCCCACCCCTCACCTCATCCACGTGTGGATCCTCCTCACAGAGTTGTGTAGATGTAAACAAACACAATGACGAAGAGGTTCAAGAAGGTGCCTATGATCCCCAGAAGGGCCAATATGGACTCCTCTCGCTCCTCTTTACCCTCTTGCGCCCGAACCTCCTCTATACTGACAGTGGTCGTCCCCATTCTGACCCCCCCACCTCTGTCTCCAGGGTGCTTATCTGTGGAGAAACAGGAGAGCAGCATGAGATGATATTTAATCAACAAGGAGTGGAAGCTTCTGTGGTTCCATCCAACACTTATGTTCTCAGATGGCCACCAGTAGTGCTCATCCAGAGGCCAGACCAAACACTCAGTGAAGCAACTCCGAGGGTGAGATTTCCCTCTACACTGATTGCCCAGCTGCGAGTATGGCGTAATGAACACAAAAGAGGATGTCTCCCCCTCACCTCAGTGATGGATTTCCCCCTCAGAAAATGATATTTCCCTGCGGAGCTGCTACAACAAGGCGACTCTTGGCAGCTGAGATGATTTACTATCCATTTAAGCCATCTCACTTGCTGTTTGCCTCTGCCATGCACACTAAATGATTTCTCTTTTCTCATCCCGTCCTTCCTTAGCTTACGGTTTAGCTTGGTACCATGTTCATTGGAGCACATGTGGAAGTGTCTGCTTCCAGATACCAGAACATTCATCTCAATGAACATCATTAAACCCTACAACTCAGCAATGTGGACAACAAGCCTTGTAGACAGTCTGACACATACAGTGGAGGGAACACTAGACAAAAGCAAGTACAATATGAAAATAGGGAGTCTTACCCTACGGCGTGGGAGATCTGGGGGAAGATCCAGCATGCTGTGGTCTCATCACAGGAGATGCATATCTGGGCTGGCGGCAACATGAGGGCCAGGTGGCCAAACATCCGATATCCCCAAGACCGTAAAGAAGGAAAAAAGAGAAATTGAGAGGTGGAGAGAGAGAGAAGGTCTACAACAGCGTCTCCTTGAGCCGTGTGCGTTACGCAGACAACAATCTCAGTCCCCAACGTCCCTCCCCTTCGCTCTCCCTCTCTACCTTTCTTTCTCTCTTTCTCTCCCTCTGGCTTTCTCTCGCTGTTTCTGTGTCAGTATTCCAGCCTCCTTACACATCACCAGCCATTCCTTTTGTTCCACGCTCATTCAGATCTTCATTTATTCTTCTTCTCATGGTTGTTTATTTATTTTTTTGTTCTTTGCTTGGACGCCTCACACCTTTCATTCAAGCGGGGCTCGGAGAAATCCGCTCCCTGCTCTCTTCCCCCCCTCCCTCTCCCTCGTTCTCCTTTTCCTTTTACCAAAATCCTCCTTAAAAAATCTCCTAGTCTCCCCTCCTTTCTCTCTCTTCCCTCCCTCTTGCTGTCACACTCTCTCGTTCTCTGCTCTGTCACTCTTGTCTATCTGACCCTTTTAGCATGTGAAAGTGAGGCGTCTCAGCATTTGTAGAAAAACTGGCCCCCACCTTCTCTCCTTTCCCTCCTCCGTGATTTCTTTCCCTCCTTTTGCGCTCCGCTTTTTCTGTGGGTGTAGAAGCCCTACAGATGTGCGTGGATGCCTCCGGATGCTCGGGAGATTGGCGATCTGTGGCTGCGAGCTCCCCACCCTGCCGTTCTCTGTCCGTAGCCGATGGCAGTCGTGTGGTTATAGGTCCCGTCTCGGAGCCTGAGAGCGCCGTGCATTGCATAACCAAGCAGAGCGACTGGTAACCGCGGAAACCGAGCGAGGGAGATCGGGAGGGTGGGCGGCGAGGAGGCTCACACGTCAAATGTCTTTATTGCCAAGAACAATGTAGAGCCACAGAGAGATGAGGAGCAGAGAACGATCCAAATTGAGAGTTGTGGAGCTGGGTCCTTTTCTTCTGAGTATTGATGATCCCATTGATCTCACAGGGCTTTTTTTCTACAAAAGACAGTCATATTTGGGAATAATGTTAAGCTATTAAATGCCTGTGTGTGAAAGGACTAATGTGTACATGTGCATGGGTGTCCAAACCATGTATTCTTTCATACTAGAGTTGTACAAATAAGGGTACCTTCTAATCTCTTTACTCAATCTCTTGTATATGTAGAGGCATCCATTGTTGTTGTAGCTAGCCA/-
- Variant Notes
-
Deletes entire transcript.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 3205 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- None
- Flanking Sequence
-
ACCTTTAAAACGCATATACAAGTTCTTAATAAGCTATGAACTAGTTTTGAGGGTTTACACTGATCTGAGAGTGGGTTGTAAAGTGTTCACACTGATCTGAGTGGAGGTTGAGAGATTGAGGCTGGTTTGAGAGCTGGTTTACACAGAGCCGTTGTGGTGGGGATTTGTATTTGATGATAAGCCCTGCAGGTACATGCTGATTTACAGGGTAGGCCTTTATTACAGCAGTGCCCTGTGGCTTTGGAATTTATTGAGGGACCTGAGACTAAGCGCAAAGCCCTGCTAACATTTCTGCAGGCAGATTTTTCTGAGCACACTTCAGTCTGACGTATTGCAACACACTTGGGTAGAGGGCAAACAGTGTTGCTATGTTTTCCTTGCAAAGATCTGCCACAAAAGCTCAATTTCATGCATGTTTAAATTGGTATGTGTGTGACAGTCGTGGGCTCTTTAGGGCACGTTCTGGTGCCTCATTCTCATTCATGAAGCTCCCATCAGCC
ATTTCTACCTCTGTCTATCACATGTGACAGGAAACTGACCTCTGCATTCTCAGAGGGTTTAAAAACTCCTCCATCACCACTGGTACAGACAGATTAAAATAGAGAAGCAAAATCATCTCTACCTCAGCTACCACATCCTCTGTTTTTCCCACTCTAGTTTTTTGTAACTGTAAACTGCTTGTCTTTATTGTGCACTGAACTCTACTAGTATTCAAAAACCACCCAAATGCATGACTCACACTCATAGATGTGCAGAACAGCACATACAAGCTTGGTCTTCTTCAAACAGGAGCATTTGATACGGCTAAAACATGCACATCATTCACGAGCTCCTGATCCATAGAATATTATTTTATTGATCAGATTATCTATGGCACAGTACATCTAGTATGTAATCATGTATCAATACAAAAGCATTTTCCTTTGCACAGAAACAACGTGTCTGACACTGCACTCAAATCAGAGAGAAAACACACACACACGCACACTCATTATTTGTCTGTTTATCCTCCCTGCTGTCAGAAAGGAGGAACTGTAGTGAAAAAGTGTCCAAATATCTGCGAACTGCCTGTTCCCATAAGGTCCAGAATTTGAAAACTGCAGATGGGTTTCAGAGTCTATCATTCTTCTCTGTTAATTCTCTCTTAATAGAAAAATATTTCATACTTCCCGTTTTTCCATTTTATTGCAGATTTTTTTTTCAATTGGTGGGCAAATTCTGAAGGAGATGTTCTGTTGCCCTGTGACGTTCTTGTTTGTCCAGTAGGGTCTTTCCCTATGTGCATCCTTATAATCACAGCCAGGCAGTGCTCGATGTAATTTCAGTTGCTGGGGAAACATACTGTCCTTTGGCTGGTGACCACATCCTGCAAGGATGCAAATCAGGTGTATCCATGATTCGTTCTCTTTATGTCCAGAGATCTGTTTTGAACTGACATCCATTGCGTTTGTGTATATCCGAATAGGTCAGAGGTCAAAGAGTAAGCGTCACTGTCTCTGACTGACGCTGCCCAGTGTCATCTTCCACCATCTTCTCTGTAAGACATCAACCCTGCTGTCATATCTTCGTCGGACCCCACCCCTCACCTCATCCACGTGTGGATCCTCCTCACAGAGTTGTGTAGATGTAAACAAACACAATGACGAAGAGGTTCAAGAAGGTGCCTATGATCCCCAGAAGGGCCAATATGGACTCCTCTCGCTCCTCTTTACCCTCTTGCGCCCGAACCTCCTCTATACTGACAGTGGTCGTCCCCATTCTGACCCCCCCACCTCTGTCTCCAGGGTGCTTATCTGTGGAGAAACAGGAGAGCAGCATGAGATGATATTTAATCAACAAGGAGTGGAAGCTTCTGTGGTTCCATCCAACACTTATGTTCTCAGATGGCCACCAGTAGTGCTCATCCAGAGGCCAGACCAAACACTCAGTGAAGCAACTCCGAGGGTGAGATTTCCCTCTACACTGATTGCCCAGCTGCGAGTATGGCGTAATGAACACAAAAGAGGATGTCTCCCCCTCACCTCAGTGATGGATTTCCCCCTCAGAAAATGATATTTCCCTGCGGAGCTGCTACAACAAGGCGACTCTTGGCAGCTGAGATGATTTACTATCCATTTAAGCCATCTCACTTGCTGTTTGCCTCTGCCATGCACACTAAATGATTTCTCTTTTCTCATCCCGTCCTTCCTTAGCTTACGGTTTAGCTTGGTACCATGTTCATTGGAGCACATGTGGAAGTGTCTGCTTCCAGATACCAGAACATTCATCTCAATGAACATCATTAAACCCTACAACTCAGCAATGTGGACAACAAGCCTTGTAGACAGTCTGACACATACAGTGGAGGGAACACTAGACAAAAGCAAGTACAATATGAAAATAGGGAGTCTTACCCTACGGCGTGGGAGATCTGGGGGAAGATCCAGCATGCTGTGGTCTCATCACAGGAGATGCATATCTGGGCTGGCGGCAACATGAGGGCCAGGTGGCCAAACATCCGATATCCCCAAGACCGTAAAGAAGGAAAAAAGAGAAATTGAGAGGTGGAGAGAGAGAGAAGGTCTACAACAGCGTCTCCTTGAGCCGTGTGCGTTACGCAGACAACAATCTCAGTCCCCAACGTCCCTCCCCTTCGCTCTCCCTCTCTACCTTTCTTTCTCTCTTTCTCTCCCTCTGGCTTTCTCTCGCTGTTTCTGTGTCAGTATTCCAGCCTCCTTACACATCACCAGCCATTCCTTTTGTTCCACGCTCATTCAGATCTTCATTTATTCTTCTTCTCATGGTTGTTTATTTATTTTTTTGTTCTTTGCTTGGACGCCTCACACCTTTCATTCAAGCGGGGCTCGGAGAAATCCGCTCCCTGCTCTCTTCCCCCCCTCCCTCTCCCTCGTTCTCCTTTTCCTTTTACCAAAATCCTCCTTAAAAAATCTCCTAGTCTCCCCTCCTTTCTCTCTCTTCCCTCCCTCTTGCTGTCACACTCTCTCGTTCTCTGCTCTGTCACTCTTGTCTATCTGACCCTTTTAGCATGTGAAAGTGAGGCGTCTCAGCATTTGTAGAAAAACTGGCCCCCACCTTCTCTCCTTTCCCTCCTCCGTGATTTCTTTCCCTCCTTTTGCGCTCCGCTTTTTCTGTGGGTGTAGAAGCCCTACAGATGTGCGTGGATGCCTCCGGATGCTCGGGAGATTGGCGATCTGTGGCTGCGAGCTCCCCACCCTGCCGTTCTCTGTCCGTAGCCGATGGCAGTCGTGTGGTTATAGGTCCCGTCTCGGAGCCTGAGAGCGCCGTGCATTGCATAACCAAGCAGAGCGACTGGTAACCGCGGAAACCGAGCGAGGGAGATCGGGAGGGTGGGCGGCGAGGAGGCTCACACGTCAAATGTCTTTATTGCCAAGAACAATGTAGAGCCACAGAGAGATGAGGAGCAGAGAACGATCCAAATTGAGAGTTGTGGAGCTGGGTCCTTTTCTTCTGAGTATTGATGATCCCATTGATCTCACAGGGCTTTTTTTCTACAAAAGACAGTCATATTTGGGAATAATGTTAAGCTATTAAATGCCTGTGTGTGAAAGGACTAATGTGTACATGTGCATGGGTGTCCAAACCATGTATTCTTTCATACTAGAGTTGTACAAATAAGGGTACCTTCTAATCTCTTTACTCAATCTCTTGTATATGTAGAGGCATCCATTGTTGTTGTAGCTAGCCA/- ACATTCTGGGCTGTTCAATTAATGTCGTTTATCTTCGACTACCCTTTTCACCGATTCTTTTTGAAGTTTTGTTCTCATCC ... - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None