Genomic Feature
ja54
- ID
- ZDB-ALT-151102-5
- Name
- ja54
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one delins (1)
- Protocol
- embryos treated with
- Lab of Origin
- Fukada Lab (Closed)
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Delins
- Variant Location
- Chr 7: 7420081 - 7420087 (GRCz11) (1) Details
- Nucleotide change
- CGAGATT/A
- Variant Notes
-
6 bp deletion. Amino Acid N18 is changed to a stop codon.
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 1 bp inserted / 7 bp deleted (1)
- Transcript Consequence
- None
- Protein Consequence
- Amino Acid Substitution: Asn>Stop at position 18 (1)
- Flanking Sequence
-
GTTAATTTGATTCAACTAAAAAATTTTTTTTACATTGTACATGTAGATATTACTATTTTTAAACAATCCCCAGCCCCAAATGACATGATTTGAATCTTTTTCCGTAAGTTGCACTACTTCAAGTGTAGTTTCAGTACTTTTTGGTCTCACCTTAAAGCAGTGTGTCTTCTGCTCTCCATCCCAGATTGTCCTCGGCAGGGGGAACTTCTTACGGATGCGGTACTTCTCTACCGGGCCGAGTGGTCTGCCCCTCAGGCGCTCCGCCTCCCGGTAATGCGCGTCCAGCCACAGGTCCTGCAGTTTAGCGTGAGATTCGCGGGTAAACCGGTGACTCTGCAGAATCTGATAGAGCGCCTCGAAATTCCCGCCATGGAACGCGACGAGAGCCCGCGCGCGCATCACCGACTCATGACGGTTGAGCAACTCTCCGGCGGAACCGGGCACGGCGGCGGGCAGAGACCAGAGAAACCGGCCCAGGCGCTCGATATCTCCTGTTTCCT
CGAGATT/A CTCGCACACTCGGGCCACCTGCTCAGGTGTGAACATCGGCAGAGGAAACATGGCTGTAGGTTTGTCTGACTAATTTGAAAACTCGCGCGCCCGTTTATACCAACGGCATTCCAGTGTGAGTAACGGACAACCAACGGCCTGAACGACTATATGAATGACTATATAGCTGACCGGTTATATAACGGAGCGACTGGATTCTCGGTAGGACGAATTCTCTGTAGGTCTTCTTAATGTGACATCTTCTAGTAAAGGAGGAGCAGCAGAAGTCAAGCCTATTTATAGAGAGATTCAATTAGCATCTTTGTGCTTGTTTTGAGGGGGATTATGCGCCTCGGTCATTAGCCTCTTAGCAGGGGGTTTGCTGTTCACGGAGGACACCGACTGGATGATCAGATTGTTAGACTCACTAACTGACTGACTGACACAGACTTCATTTCATTGTGCTGGATAAATGGACCTATTATGGAAACGACCCAGTCAGTGAAAACTGCTCTGCGCCT - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None