Genomic Feature
j131x8
- ID
- ZDB-ALT-150923-1
- Name
- j131x8
- Synonyms
- None
- Affected Genomic Region
- Construct
- None
- Type
- Allele with one deletion (1)
- Protocol
- sperm treated with g-rays
- Lab of Origin
- Stephen L. Johnson Lab
- Current Source
- Other Pages
Notes
No data available
Variants
- Variant Type
- Small Deletion
- Variant Location
- Chr 20: 9232401 - 9232782 (GRCz11) (1) Details
- Nucleotide change
- AGGGTGGGTTAAGGTGTGTTGGATGGTCAAAAGTGTAATTACATCTGTAATTACAAGCCAGTATTTAATCAAGCATTAGTACAATGGAAAAGCATGCGGTTACACAATAAGTGCATTGTAACAAATTATTAGTTTCAGTGTAAGTACATTACATTAGTTAAGGCCACGTAATATAAAGTGGGGCTTAAGATTTTATTAAATAATTCATATATTATTATTATTTTAATAGTAATAGATTTTCTAATTTTTTACTCTTATGATTTCAGGTTATGGTAATGTTGCTCCAAAGACAACTGGAGGTCGTTTATTCTGTATCCTCTATGGTCTCTGTGGCATTCCTCTGTGCCTCACCTGGATAAGTGAGCTGGGTACATTTTTTGGC/-
- Variant Notes
Effect on DNA/cDNA, transcript, protein (from publications)
- DNA/cDNA Change
- 384 bp deleted (1)
- Transcript Consequence
- Frameshift, Premature Stop (1)
- Protein Consequence
- Polypeptide Truncation (1)
- Flanking Sequence
-
TCTTGTGATTTTTTACTTGTTTATATGCTTGCTTACTCACAAAGTTGACCTCTTTTTTCCAATCCTGACTTTATTTCTTGCAGTTCTGATTGTATATTTGTTAGTTCTCATTTTTTTTGCAGTGCTGACTTGATTTATCAGACTTGCAAGTTTGAAACAGAAATTTAAGCTTACATGACGGAAACAAGCTTCTGTAGTTTACTAATAAATGGCTCTGATATGGTTAACAAATATTTACGAATCAAGTTTTTAAAGTCAATGACTAACTTTACATAATGATGTTGATTTGTCTGTGAAAATGTTACAAAATCATTTATTTTCAGGTAAATGAGGGTTTGGTCCCACTCTATATTAAGTGGCCTTAACTACAATGTACTTGCATCAAAAATGCCTATATTCAATGTACTTACTGTGGTCATAATGTATTGCAGAACACTTATGGTATTCGAGGTGGGATACAGTTAGGGTTAGGGACCGGTTTAGTGATATAAGTAGGTTTA
AGGGTGGGTTAAGGTGTGTTGGATGGTCAAAAGTGTAATTACATCTGTAATTACAAGCCAGTATTTAATCAAGCATTAGTACAATGGAAAAGCATGCGGTTACACAATAAGTGCATTGTAACAAATTATTAGTTTCAGTGTAAGTACATTACATTAGTTAAGGCCACGTAATATAAAGTGGGGCTTAAGATTTTATTAAATAATTCATATATTATTATTATTTTAATAGTAATAGATTTTCTAATTTTTTACTCTTATGATTTCAGGTTATGGTAATGTTGCTCCAAAGACAACTGGAGGTCGTTTATTCTGTATCCTCTATGGTCTCTGTGGCATTCCTCTGTGCCTCACCTGGATAAGTGAGCTGGGTACATTTTTTGGC/- AGCAGGACAAAGCGTCTAAGTCAGTTGCTCCTCCACAGTGGCCTCAATGTGGTAAGAATATCATTAAGATCAGCTGCTTCACCCTTGTAAAGATGAAAAAGCATTTTTTAAAACATTGTTCTCATTTTCTCTTCTTTGACAGAGAAAAGTTCAGTTCATCTGCACAATTGTGTTCCTTTTATGGGGCTTCTTGGTTCACTTAATCATCCCAGCCTTTGTGTTCATGTTCTTTGAGAATTGGACTTACTTAGAAGGCCTGTACTTCTCCTTCACCACCCTGACGACTGTCGGTTTTGGTGACTATGTGGCAGGTAACTTTAAAATTGCCAAATGGATTTTTACATTTGTGCTGGGAAGAACGGGGGATTTGACACATTTAAATGAAAACACTAAAAGTACTTTTATGCATTCAGCAACAGGACATAAAAACAAAACACATTTAATCATAGGTCTTAAACTCGATTCCTGAAGGGCCGCAGCTCTGCAGTTTTCTTCAACCC - Additional Sequence
- None
Fish
Supplemental Information
- Genotyping protocol
- None