Genomic Feature

pd1085

ID
ZDB-ALT-140127-1
Name
pd1085
Synonyms
  • ccn1.9 (1)
Affected Genomic Region
Construct
None
Type
Allele with one point mutation (1)
Protocol
adult males treated with ENU
Lab of Origin
Bagnat Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Point Mutation
Variant Location
Chr 20: 38845486 (GRCz11) (1) Details
Nucleotide change
G/A
Variant Notes
Ryan and al. (2013): G-to-A mutation in an\nessential splice donor site on exon  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
G>A in Exon 13 (1)
Transcript Consequence
Splice Site (1)
Protein Consequence
None
Sequences
Flanking Sequence
CCATGTTTAATTGAGTTCCCAAAGTGCTCTTATGAGAGTTGGGAGAAAGTTCAGTGTGACAAACAGGATAATGCTGAAGAGCTTGGCTGTGGCTCCTCTTCCTTTTTGTGTGTAATGTAGTGGAAAGTAAAAGGTGATGAGCATGTTGTACTTCAGTAAACAACATCGCTTTCTCATTACAGGTGGCGTGGCAGGGCTCTGGGGGAAATGAAAAGTTTTTCTTTGAGAATGAAACGGTACAGTTTGTTTTATTGTATTATTGTGTGTTATTAAGATGCTTCGATCGTTTATAAAAATGAGGCCAAGAAAATGACTGGGTTTAATGAATCGTGTAGCACTAGCTGATTTGATTAAAGTCGCTGCTGTTTAATTGTAAACTGCTTTATTTCCGGGTAGGTGTGTATGATTTTCAATGCTGGAGAGCTGGCACTGGTGGAATATGGAAGCAATGACATCCTGGGATCTGTTCGAACAGAGTTTATGAACCCACACCTTATCAG
G/A TCTGTCATCTTTACAGTTTGGCAAAGTAAATTTAAAATAATTAACTTTTTAAAATATTAGTTATTCAAAAAAAGACTAACGTTTCTATTAAACATTTTGTTATCAAAATATTATGTTGAAAAATAATCACAGAAGCAAATAATAATTATAATAATAATAATAATAATAATAGTAACTAATTATATTAATTAAAAAAAAGTTTTAATTTATTATTCATTCATTCATCTTATTTTTGGATTAGTCCATTTTTTAATATGGGGTCGTCACAGTGGAATGGACTGCCAACTTATCCAGCATATGTTTTATGCAGCGGATGCCCTTCCAGCTGCAACCCATCTCTGGGAAACATCCATACACACTCATACACTACGGACAGTTTAGCCTACCCAATTCACCTGTATTGCATGTATTTGGACTGTGGGGGAAACCGGAGCACCCGGAGCAAACCCACACAAATGTGTGGAGAACATGCAAACTCCACACAGAAACGCCAACTGACC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations