Genomic Feature

b508

ID
ZDB-ALT-041111-4
Name
b508
Synonyms
None
Affected Genomic Region
Construct
None
Type
Allele with one deletion (1)
Protocol
adult males treated with ENU
Lab of Origin
Eisen Lab
Current Source
Other Pages
Notes
No data available
Genome Browser
Variants
Variant Type
Small Deletion
Variant Location
Chr 18: 123418 - 123485 (GRCz11) (1) Details
Nucleotide change
CAGCAGCAGATCCTCATATCGAGAGACGTCCTCCAGCGACACGCGCGTCCTCTCCTGCTTACTGAGTG/-
Variant Notes
Sequencing of b508 reveals a 68 nucleotide deletion (aa 1410-1432) comprising a  ...
Effect on DNA/cDNA, transcript, protein (from publications)
DNA/cDNA Change
68 bp deleted from position 4373 to 4440 in GenBank:AY860421 (1)
Transcript Consequence
Frameshift, Premature Stop (1)
Protein Consequence
Polypeptide Truncation (1)
Sequences
Flanking Sequence
CCAAATATCTAAAAGTTCTCAAATCAAGAAGCATTTTCTACACAAGCAAAATATGTTGTCTTGTTTTAAGAAATAATAAACCAAAATGTAGTGAATTTTTCCTTAAATCAAGCTAAATAATCTGTCAATGGGGTCAGCAAAACAATCTTACGTCAAAAGGAAAAGCAAGATTATTTTGCTGACCCCATTGACAGATTATTTAGCTTGATTTAAGGAAAGACTCACTTTATTTTGGCAGATTATTTCTTAAAACAAGACAACATATTTTGCTTGTCTAGAAAACGCTTCTTGATTTGAGAACTTTTAAACACACACTCATCAGCATCACTGTCAGATCTCTGAACACACAGGATGATGTCTTCAATCTAGAGTCAGAAACTCACACACACTCACACACACACACAGCAGCTCTATCTGTCATCTAGCAGCCGTCCCTGAGGGAAACCCGTTCACACACAGCTCACACCACACTAAACATTCTGAACGTGTGTTTGACTGAC
CAGCAGCAGATCCTCATATCGAGAGACGTCCTCCAGCGACACGCGCGTCCTCTCCTGCTTACTGAGTG/- CTGAAACACACACACACACACACACACACACACACACACACACACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACGCACACACGCGCACACACACGCGCACACACACGCGCACACACACACACACGCACACACACACACACACGCGCACACACACACACACACACACACACACACGCGCACAGATAGACAAACATGCACAAGCACACAAACACAGAGAGTGACTCCATCAGTGTGTGAGATGCTCTTCAGATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTCATCAGTTAATGTTTACAGCATTCACTGGTGTTGCTCAAGGTTTACACTCACTGGACTCTGGATGCAGGAGCGAAGGGTTTCTGTCCAACTCTGTGAAGCCGGCGTAAGAGTTCACCGTCCGCATGTTACCCTGCAGGAGCGTGCGCAC
Additional Sequence
None
Fish
Supplemental Information
Genotyping protocol
None
Citations
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