Transcript

col2a1b-201

ID
ZDB-TSCRIPT-141209-500
Name
col2a1b-201 Nomenclature History
Previous Names
  • col2a1b-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000159169 (1) [ Show ] (double-click sequence to select) [Download] 
>tpe|ENSDART00000159169.3|gene_biotype:protein_coding|ENSDARG00000011407.11 transcript_biotype:protein_coding gene_symbol:col2a1b cdna chromosome:GRCz11:11:32007:55224:-1
GGAAGTCCGGGCCCTCGGGGACGAGATGGAGAGCCGGGAA
CCCCAGGAAACCCTGGACCTCCAGGACCTCCAGGACCCAA
CGGACCACCAGGCCTTGGCGGAGTGAGTATCTGTCAGTTA
ACACACACACACACACACACACACACATGCTGCTCATGTA
AATATTGTTGCTGGCCTGTGATTGGACGCTCAGACTGTGA
TGTGATTGGTGTGTGTGTTCTTCAGGGTCCTGAAGGATTC
CAAGGAAACCCAGGAGAAGGCGGAGAGCCGGGATCATCCG
GCCCAATGGGTCCCCGTGGCCCACCCGGACCCCCAGGGAA
ACCAGGAGATGATGGTGAGCCGGGCAAACCTGGCAACGGT
GGAGAGCGTGGACCCCCAGGCCCTCAGGGAGCTCGTGGAT
TCCCAGGAACACCCGGACTACCTGGAATCAAGGGACACAG
AGGTTACACAGGTCTTGATGGTGCTAAAGGAGAGTCTGGA
GCTACTGGAGCAAAAGGTGAATCCGGCTCTCCTGGAGAAA
GTGGAGCTCCTGGACCGATGGGTCCGCGAGGTCTGCCTGG
TGAACGGGGGCGTCCAGGACCGTCAGGAGCTTCTGGTGCT
CGTGGTAATGACGGTCTGCCTGGCGGTGCTGGTCCACCGG
GTCCCGTTGGTACAGCAGGATCTCCCGGGTTCCCAGGATC
CCCCGGTGCAAAGGGTGAAGCGGGACCAACCGGAGCCCGA
GGGCCTGAGGGAGCACAGGGGCCCCGTGGAGAGTCTGGTG
TTCCTGGAGCCTCGGGACCCTCTGGAGTCTCTGGTAACCC
TGGTTCTGACGGGATGCCTGGAGCCAAAGGATCAGTGGGC
GCTCCGGGTATCGGTGGAGCTCCTGGTTTCCCGGGTCCGC
GTGGTCCTCCAGGCCCTCAGGGAGCGACAGGTCCTCTAGG
GCCAAAGGGTCAATCTGGGGACTCGGGCCTCGCAGGGTTC
AAAGGTGAAGCCGGTCCTAAAGGAGAGATTGGAAATGCTG
GTCTACAAGGGGCTCCAGGTCCTGCTGGAGAAGAAGGCAA
GCGAGGACCCAGAGGAGAGCCTGGTGCTGCGGGCCCCCCA
GGGCCAACTGGAGAACGGGGAACGCCTGGTAATCGAGGTT
TTCCCGGACAAGACGGTCTTGCTGGTCCAAAGGGTGCGCC
CGGAGAGCGTGGACCTGCAGGCGTATCGGGACCTAAAGGA
GCCGGTGGAGATCCAGGGCGGCCGGGAGAACCAGGTCTAC
CTGGTGCAAGGGGTTTGACGGGACGTCCAGGAGACGCCGG
TCCACAGGGCAAAGTCGGTCCGTCTGGCGCTCCGGGTGAA
GACGGTCGTCCGGGACCCCCGGGGCCTCAGGGTGTTCGCG
GTCAGCCAGGAGTCATGGGATTCCCGGGACCCAAGGGTGG
AAATGGTGAGGCTGGAAAGGCTGGAGAGAAGGGACTCGCT
GGAGCTCCGGGTCTGCGTGGTCTGCCTGGTAAAGATGGAG
AGACCGGTGCTGCTGGGCCTCCAGGACCTGCCGGCTCTGC
GGGAGAGCGAGGCGAGCAGGGACAGCCGGGACCATCAGGC
TTCCAGGGTCTGCCTGGACCCCCGGGGCCCCCCGGTGAGG
GAGGTAAACCTGGAGATCAGGGAGTTCCTGGAGAGGCCGG
AGGGGCAGGGGCTACCGGACCCCGAGGTGAGCGAGGGTTC
CCAGGAGAGAGAGGCGGTGCTGGGCCACAGGGGCTCCAGG
GGCCCCGGGGTCTACCAGGAACACCAGGAACCGACGGCCC
CAAGGGTGGTGTGGGACCCGCGGGGACAGCTGGAGCTCAG
GGTCCTCCAGGACTGCAGGGAATGCCCGGAGAGAGAGGCA
CGTCTGGGAATCCAGGACCAAAGGGCGACCGAGGCGATAA
TGGAGATAAGGGACCAGAAGGAGCTCCGGGTAAAGACGGC
TCAAGAGGTTTAACGGGTCCAATTGGTCCAACAGGTCCTG
CGGGACCCAACGGTGAAAAGGGAGAATCGGGACCCGCGGG
ACCGTCTGGAGTTGCGGGGACTCGCGGTGTTCCTGGTGAC
CGAGGAGAGACTGGCCCTCCTGGTCCTGCTGGTTTTGCTG
GTCCACCAGGTGCAGATGGACAGCCGGGAGTGAAAGGAGA
GCAGGGTGAAGGTGGACAGAAGGGTGATGCTGGAGCCCCG
GGCCCTCAGGGGCCCTCTGGAGCTCCGGGCCCGCAGGGAC
CAACCGGTGTGTCTGGACCAAAAGGGGCTCGTGGTGCTCA
AGGCCCTCCTGGTGCCACGGGTTTCCCCGGAGCCGCTGGA
AGAGTTGGACCTCCTGGTCCTAATGGTAACCCTGGTCCAG
CCGGTCCTGCTGGTCCTCCTGGTAAAGATGGGCCAAAGGG
TGTCAGAGGAGACGGTGGTCCTCCTGGAAGACCTGGAGAC
GCTGGTTTACGGGGTTCGGCTGGTCCTGCAGGAGAGAAGG
GAGATCCTGGTGAAGACGGTCCTCACGGTCCGGACGGTCC
CGCAGGTCCCCAGGGTCTGGCCGGTCAGCGCGGTATCGTT
GGTCTTCCAGGACAAAGAGGCGAAAGAGGATTCCCCGGCC
TGCCTGGACCCTCCGGTGAGCCGGGTAAGCAGGGGGCTCC
TGGGGGACCCGGGGACAGAGGACCTCCTGGCCCTGTAGGG
GCACCAGGTCTGACCGGCGCTGCAGGAGAGCCGGGGAGAG
AGGGCAATCCTGGATCTGATGGTCCTCCTGGTCGAGATGG
TTCTGCTGGAATAAAGGGAGACCGAGGTGACACGGGTCCA
GCTGGAGCTCCTGGTGCTCCAGGGGGTCCTGGTGCTCCTG
GTCCAGTCGGACCCACTGGTAAACAGGGAGACAGAGGAGA
GGCGGGTCCCCATGGGCCTTCTGGACCTCCAGGGCCTGCT
GGAGCTCGGGGAATGCCTGGACCACAAGGACCGCGTGGAG
ATAAAGGAGAAGCTGGGGATTCGGGAGATAGAGGACAGAA
AGGACACAGAGGCTTCACTGGTCTCCAAGGTCTGCCTGGG
TCTCCTGGTCAACCTGGTGATCAAGGTGCTTCTGGACCCT
CTGGACCTGGTGGAGCAAGAGGACCCCCAGGCCCTGTCGG
TCCAGCTGGAAAAGATGGAGCAAACGGTTTACCTGGACCC
ATTGGACCCCCGGGACCCCGTGGTCGTTCTGGGGAGACTG
GTCCATCAGGTCCTCCTGGAACTCCTGGACCCCCTGGTCC
TCCTGGCCCTCCGGGACCTGGCATCGACATGTCAGCCTTT
GCTGGTCTGTCTCAGCTTGAGAAGTCTCCTGATCCCCTGA
GGTACATGAGGGCAGACCAGGCCGCAGATGGTAACCATCA
GCATGATGCAGAGGTGGATGCCACGCTCAAATCCCTGAAC
AACCAGATGGAGAACATCCGCAGGCCTGATGGCACCAAAA
AGAGCCCGGCCCGGACCTGCAGAGACCTGAAGCAGTGCCA
CCCAGACTGGAAGAGCGGCGAATACTGGATTGACCCGAAC
CAGGGCTGCACCGTCGATGCTATCAAAGTGTTCTGCAACA
TGGAGACCGGCGAGAGCTGCATTTACCCCAAACCTGCCAA
CATCCCACGCAAGAACTGGTGGACTACGAAGGGTGGGGAT
CGCAAACACATTTGGTTTGGGGAAGCCATGAATGGAGGAT
TCCACTTTAACTATGGAGACGAGAATCTGTCGCCAAATAC
AGCCAGTATTCAGATGACCTTCCTCAGACTGCTGTCCACT
GAAGCCTCGCAGAACCTTACCTACCACTGCAGGAACAGCA
TCGCCTACATGGACGAATCCTCTGGGAACCTGAAGAAGGC
TCTGCTGCTGCGCGGATCCAATGATGTGGAGATCCGGGCG
GAAGGAAACAGCCGCTTCACCTACAGCGTTCTGGAGGACG
GATGCAAGAAACACACAGGACAGTGGAGCAAGACCGTCAT
TGAGTATAAATCCCAGAAGACGTCTCGCCTGCCCCTTGTG
GACATTGCCCCTGTGGATATAGGAGGAGCACATCAGGAGT
TCGGAGTGGATGTAGGAGCCGTCTGTTTCTTATAAGACAG
AAGGACGGATTAAACACACACTTGAGAGTGAGGAGTAAAG
AAAGAGAGAAACTAAAGAACTAGACATTTTAAGCGGGACA
TCTTTATGATAGACAACAGAAGTGCTTCCGAACGTATTTT
TAGGATATGCACTGATAGGCAGTGTCAGTCTTCACCTGTG
ACTGTGCTGTCACTCATTCCCACCTCCACCCTCCGGGACC
ACCTCCATCTACAGCAGAACGGTGTATGAGGGAGAAACCA
GAGCAAAGACAGAAGCAGAAGAGTCTTCGTATTTATTTAT
TGTTAAGGTGCTATTCCCCTGTCATTAGGATCATCAGCGA
CAGTCCCCGTATTAAGCATTCAACTCCCACAGACTTTACA
CCACCCTGAGCCTTCATATGCGAGTGCTGGTGTTTCTCAC
GGCCACAGTCTGTGTACATCACTGCGCATTCAAGCATAAT
CAGCGGTGCTAATCTTTCAGAATGCCTTGCAGATTTTTAC
AACAGCCTGATATATAATAGACATCTAATTGTTTGTTTGT
ATATATGTGTGTGTGTGTGTGTGTGTGTGTGCGCGCATTA
CAGTTAGCTTTTCATTCTACAGTCCCCTAACCCCTATTAA
GGCAGCCTGTTTAGTGTACTTTATTAGAGACCCTTCATGT
AGTGGATTTACATTTGAAGCTACCTCATGCTGGACAAAAC
AATCACAGAGAGAGCAGTCTTTACTAGAGCCTCGAATCAG
GACAAAGCCAGACTGTGCGCTGGTCACAATCAAGTAAGAT
CAATGAGATGTCATTGCGTCTGCCCCATTCATGCCTCTTT
CTGAAATCGCCGTTTGCTAATGCTAGCTCAGTCGGTCTCA
TCCTGTAGACTGAAAACAGATGCATGTGATAGTGGAAAAG
CTAAGCACTGTTGTAGTATTGTGTTCATTTTGCTGTTGTA
GTTTTCCTGAATGCCAATGTTTAAAGTTGTACACTAGAGA
TGCTGTTTATCCTCTCTCTTTGGTTTTGGATGCACTCTTA
GATGTAGGGGAAGAGCCGTGTAGTCGAGCGCATCAGCTCT
CCTGCCATCAGTGTGTGTGCGGTGTTTGCTTCATCTTTTG
TTGTGTTTGTTTTCTAAAATAAAAGGATGCTGCATCTC
OTTDART00000059032 (1) [ Show ] (double-click sequence to select) [Download]
ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT 
>tpe|OTTDART00000059032|OTTDARG00000040928|ZDB-GENE-050302-9 col2a1b|OTTDARP00000046104 col2a1b-001 LG_none 1 FP326665.10,CABZ01072249.1,CABZ01072248.1,CABZ01072247.1,CABZ01072246.1,CABZ01072245.1,CABZ01072244.1,CABZ01072243.1,CABZ01072242.1,CABZ01072241.1,CABZ01072240.1,CABZ01072239.1,CABZ01072238.1,CABZ01083369.1,CABZ01085324.1,CABZ01085323.1,CABZ01085322.1,CABZ01109530.1,CABZ01109529.1 Danio rerio protein_coding KNOWN, 4933 bp
GGTCCTCAAGGATTCCAAGGAAACCCAGGAGAAGGCGGAG
AGCCGGGATCATCCGGCCCAATGGGTCCCCGTGGCCCACC
CGGACCCCCAGGGAAACCAGGAGATGATGGTGAGCCGGGC
AAACCTGGCAACGGTGGAGAGCGTGGACCCCCAGGCCCTC
AGGGAGCTCGTGGATTCCCAGGAACACCCGGACTACCTGG
AATCAAGGGACACAGAGGTTACACAGGTCTTGATGGTGCT
AAAGGAGAGTCTGGAGCTACTGGAGCAAAAGGTGAATCCG
GCTCTCCTGGAGAAAGTGGAGCTCCTGGACCGATGGGTCC
GCGAGGTCTGCCTGGTGAACGGGGGCGTCCAGGACCGTCA
GGAGCTTCTGGTGCTCGTGGTAATGACGGTCTGCCTGGCG
GTGCTGGTCCACCGGGTCCCGTTGGTACAGCAGGATCTCC
CGGGTTCCCAGGATCCCCCGGTGCAAAGGGTGAAGCGGGA
CCAACCGGAGCCCGAGGGCCTGAGGGAGCACAGGGGCCCC
GTGGAGAGTCTGGTGTTCCTGGAGCCTCGGGACCCTCTGG
AGTCTCTGGTAACCCTGGTTCTGACGGGATGCCTGGAGCC
AAAGGATCAGTGGGCGCTCCGGGTATCGGTGGAGCTCCTG
GTTTCCCGGGTCCGCGTGGTCCTCCAGGCCCTCAGGGAGC
GACAGGTCCTCTAGGGCCAAAGGGTCAATCTGGGGACTCG
GGCCTCGCAGGGTTCAAAGGTGAAGCCGGTCCTAAAGGAG
AGATTGGAAATGCTGGTCTACAAGGGGCTCCAGGTCCTGC
TGGAGAAGAAGGCAAGCGAGGACCCAGAGGAGAGCCTGGT
GCTGCGGGCCCCCCAGGGCCAACTGGAGAACGGGGAACGC
CTGGTAATCGAGGTTTTCCCGGACAAGACGGTCTTGCTGG
TCCAAAGGGTGCGCCCGGAGAGCGTGGACCTGCAGGCGTA
TCGGGACCTAAAGGAGCCGGTGGAGATCCAGGGCGGCCGG
GAGAACCAGGTCTACCTGGTGCAAGGGGTTTGACGGGACG
TCCAGGAGACGCCGGTCCACAGGGCAAAGTCGGTCCGTCT
GGCGCTCCGGGTGAAGACGGTCGTCCGGGACCCCCGGGGC
CTCAGGGTGTTCGCGGTCAGCCAGGAGTCATGGGATTCCC
GGGACCCAAGGGTGGAAATGGTGAGGCTGGAAAGGCTGGA
GAGAAGGGACTCGCTGGAGCTCCGGGTCTGCGTGGTCTGC
CTGGTAAAGATGGAGAGACCGGTGCTGCTGGGCCTCCAGG
ACCTGCCGGCTCTGCGGGAGAGCGAGGCGAGCAGGGACAG
CCGGGACCATCAGGCTTCCAGGGTCTGCCTGGACCCCCGG
GGCCCCCCGGTGAGGGAGGTAAACCTGGAGATCAGGGAGT
TCCTGGAGAGGCCGGAGGGGCAGGGGCTACCGGACCCCGA
GGTGAGCGAGGGTTCCCAGGAGAGAGAGGCGGTGCTGGGC
CACAGGGGCTCCAGGGGCCCCGGGGTCTACCAGGAACACC
AGGAACCGACGGCCCCAAGGGTGGTGTGGGACCCGCGGGG
ACAGCTGGAGCTCAGGGTCCTCCAGGACTGCAGGGAATGC
CCGGAGAGAGAGGCACGTCTGGGAATCCAGGACCAAAGGG
CGACCGAGGCGATAATGGAGATAAGGGACCAGAAGGAGCT
CCGGGTAAAGACGGCTCAAGAGGTTTAACGGGTCCAATTG
GTCCAACAGGTCCTGCGGGACCCAACGGTGAAAAGGGAGA
ATCGGGACCCGCGGGACCGTCTGGAGTTGCGGGGACTCGC
GGTGTTCCTGGTGACCGAGGAGAGACTGGCCCTCCTGGTC
CTGCTGGTTTTGCTGGTCCACCAGGTGCAGATGGACAGCC
GGGAGTGAAAGGAGAGCAGGGTGAAGGTGGACAGAAGGGT
GATGCTGGAGCCCCGGGCCCTCAGGGGCCCTCTGGAGCTC
CGGGCCCGCAGGGACCAACCGGTGTGTCTGGACCAAAAGG
GGCTCGTGGTGCTCAAGGCCCTCCTGGTGCCACGGGTTTC
CCCGGAGCCGCTGGAAGAGTTGGACCTCCTGGTCCTAATG
GTAACCCTGGTCCAGCCGGTCCTGCTGGTCCTCCTGGTAA
AGATGGGCCAAAGGGTGTCAGAGGAGACGGTGGTCCTCCT
GGAAGACCTGGAGACGCTGGTTTACGGGGTTCGGCTGGTC
CTGCAGGAGAGAAGGGAGATCCTGGTGAAGACGGTCCTCA
CGGTCCGGACGGTCCCGCAGGTCCCCAGGGTCTGGCCGGT
CAGCGCGGTATCGTTGGTCTTCCAGGACAAAGAGGCGAAA
GAGGATTCCCCGGCCTGCCTGGACCCTCCGGTGAGCCGGG
TAAGCAGGGGGCTCCTGGGGGACCCGGGGACAGAGGACCT
CCTGGCCCTGTAGGGGCACCAGGTCTGACCGGCGCTGCAG
GAGAGCCGGGGAGAGAGGGCAATCCTGGATCTGATGGTCC
TCCTGGTCGAGATGGTTCTGCTGGAATAAAGGGAGACCGA
GGTGACACGGGTCCAGCTGGAGCTCCTGGTGCTCCAGGGG
GTCCTGGTGCTCCTGGTCCAGTCGGACCCACTGGTAAACA
GGGAGACAGAGGAGAGGCGGGTCCCCATGGGCCTTCTGGA
CCTCCAGGGCCTGCTGGAGCTCGGGGAATGCCTGGACCAC
AAGGACCGCGTGGAGATAAAGGAGAAGCTGGGGATTCGGG
AGATAGAGGACAGAAAGGACACAGAGGCTTCACTGGTCTC
CAAGGTCTGCCTGGGTCTCCTGGTCAACCTGGTGATCAAG
GTGCTTCTGGACCCTCTGGACCTGGTGGAGCAAGAGGACC
CCCAGGCCCTGTCGGTCCAGCTGGAAAAGATGGAGCAAAC
GGTTTACCTGGACCCATTGGACCCCCGGGACCCCGTGGTC
GTTCTGGGGAGACTGGTCCATCAGGTCCTCCTGGAACTCC
TGGACCCCCTGGTCCTCCTGGCCCTCCGGGACCTGGCATC
GACATGTCAGCCTTTGCTGGTCTGTCTCAGCTTGAGAAGT
CTCCTGATCCCCTGAGGTACATGAGGGCAGACCAGGCCGC
AGATGGTAACCATCAGCATGATGCAGAGGTGGATGCCACG
CTCAAATCCCTGAACAACCAGATGGAGAACATCCGCAGGC
CTGATGGCACCAAAAAGAGCCCGGCCCGGACCTGCAGAGA
CCTGAAGCAGTGCCACCCAGACTGGAAGAGCGGCGAATAC
TGGATTGACCCGAACCAGGGCTGCACCGTCGATGCTATCA
AAGTGTTCTGCAACATGGAGACCGGCGAGAGCTGCATTTA
CCCCAAACCTGCCAACATCCCACGCAAGAACTGGTGGACT
ACGAAGGGTGGGGATCGCAAACACATTTGGTTTGGGGAAG
CCATGAATGGAGGATTCCACTTTAACTATGGAGACGAGAA
TCTGTCGCCAAATACAGCCAGTATTCAGATGACCTTCCTC
AGACTGCTGTCCACTGAAGCCTCGCAGAACCTTACCTACC
ACTGCAGGAACAGCATCGCCTACATGGACGAATCCTCTGG
GAACCTGAAGAAGGCTCTGCTGCTGCGCGGATCCAATGAT
GTGGAGATCCGGGCGGAAGGAAACAGCCGCTTCACCTACA
GCGTTCTGGAGGACGGATGCAAGAAACACACAGGACAGTG
GAGCAAGACCGTCATTGAGTATAAATCCCAGAAGACGTCT
CGCCTGCCCCTTGTGGACATTGCCCCTGTGGATATAGGAG
GAGCACATCAGGAGTTCGGAGTGGATGTAGGAGCCGTCTG
TTTCTTATAAGACAGAAGGACGGATTAAACACACACTTGA
GAGTGAGGAGTAAAGAAAGAGAGAAACTAAAGAACTAGAC
ATTTTAAGCGGGACATCTTTATGATAGACAACAGAAGTGC
TTCCGAACGTATTTTTAGGATATGCACTGATAGGCAGTGT
CAGTCTTCACCTGTGACTGTGCTGTCACTCATTCCCACCT
CCACCCTCCGGGACCACCTCCATCTACAGCAGAACGGTGT
ATGAGGGAGAAACCAGAGCAAAGACAGAAGCAGAAGAGTC
TTCGTATTTATTTATTGTTAAGGTGCTATTCCCCTGTCAT
TAGGATCATCAGCGACAGTCCCCGTATTAAGCATTCAACT
CCCACAGACTTTACACCACCCTGAGCCTTCATATGCGAGT
GCTGGTGTTTCTCACGGCCACAGTCTGTGTACATCACTGC
GCATTCAAGCATAATCAGCGGTGCTAATCTTTCAGAATGC
CTTGCAGATTTTTACAACAGCCTGATATATAATAGACATC
TAATTGTTTGTTTGTATATATGTGTGTGTGTGTGTGTGTG
TGTGTGCGCGCATTACAGTTAGCTTTTCATTCTACAGTCC
CCTAACCCCTATTAAGGCAGCCTGTTTAGTGTACTTTATT
AGAGACCCTTCATGTAGTGGATTTACATTTGAAGCTACCT
CATGCTGGACAAAACAATCACAGAGAGAGCAGTCTTTACT
AGAGCCTCGAATCAGGACAAAGCCAGACTGTGCGCTGGTC
ACAATCAAGTAAGATCAATGAGATGTCATTGCGTCTGCCC
CATTCATGCCTCTTTCTGAAATCGCCGTTTGCTAATGCTA
GCTCAGTCGGTCTCATCCTGTAGACTGAAAACAGATGCAT
GTGATAGTGGAAAAGCTAAGCACTGTTGTAGTATTGTGTT
CATTTTGCTGTTGTAGTTTTCCTGAATGCCAATGTTTAAA
GTTGTACACTAGAGATGCTGTTTATCCTCTCTCTTTGGTT
TTGGATGCACTCTTAGATGTAGGGGAAGAGCCGTGTAGTC
GAGCGCATCAGCTCTCCTGCCATCAGTGTGTGTGCGGTGT
TTGCTTCATCTTTTGTTGTGTTTGTTTTCTAAAATAAAAG
GATGCTGCATCTC
Related Transcripts
Transcripts related to col2a1b
No other transcripts related to col2a1b
Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations
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