Transcript

cep44-202

ID
ZDB-TSCRIPT-141209-269
Name
cep44-202 Nomenclature History
Previous Names
  • cep44-001
  • ch73-317e19.2-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000127635 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000127635.3|gene_biotype:protein_coding|ENSDARG00000053106.6 transcript_biotype:nonsense_mediated_decay gene_symbol:cep44 cdna chromosome:GRCz11:1:38362348:38374799:1
GTATCCACTGCATAGAAACCAATAACAACAATCTTGAATC
CTTTAGCGGCAAAAACAAAAGGAAGGGATTAGCAATAACT
CCGTTACTAATATTTAGCCTTCGAGATGGCCACTGGTGAC
CTGAAGGGATGTCTCAGAAAACTGGAAGCGTCTCTTCGGT
CTCTGAAGTATCCCAGAGATGTGGATTATCAAAGATTGGC
TGTTGGAGATCCATCAGCGTGTCTTCCTATTGTAAGCTTT
GCCTTCACGTCCTTTTCCCCCTCACTCACAGAGTACCTGG
TCGATTTTGGCGTGGAACTAACCGGAATGAATGATTTGCG
ATTTATTGAGAATGTGTACAAGGTCTTGCGGGATGTTTTC
AGCTATAAACCACTGTTGACCAAACAGCAGTTCCTTCAGT
TTGGGTTTGCAGAGAGGAAAGTGAGCATTCTCTGTGATGT
CATTGGCCTTGTTCTCAGCAAACACAAAGAACTCACTAAA
AATAGCAAGCATCTGAGTAAGCCAAAGAAAAGGCCTGTAT
TGAAGAGCTGTGTTAAAAATGAAATTCCCTCTGATGACAG
TAACTCACAGGAATTAACAGCCCTGATGATGCCTCTGAAG
CAGCCACTGGTAGAAAGGCATCTTGGCGGCAGCTCGGCAG
CAGCTCAAATCAGACACTCCTCAGCTGAACATCCACAGCA
GGAAGAGGAATCAGAAAAGGAGTTAGACAGTGAACGGAGT
GTGTGTTGGAAAGCCGACTGAGAGTTCTGGAAGAAGGTCT
TCTTGAGACTGTTGGCAGACTAGAGCAACGACTGGCTCTC
ATGGAGCTCAAGATACATGCTCTGGAAAAAAGCTTGGCTG
GCAAGATCATCATCGAGAGCAACCAGTGGGAGAACTTGGA
GAGTCGCGTGCTGCTGCTGGAAACCAGGCTGGCGTTGACC
TCAGCACAGGGTCTAACATCAGGAGATGGAATCCTCAGCA
CACAAAACAATGAATTCAAAGAGGATACAGTATCTGCAAA
TGGCTCTTCCGCTGTGATTCAAACATCACTTGATGACAAT
GACAATGGGAACATAGCCAGTCCTTTACCAACAGCTTCAC
AGAGTTTTAAAGAAAGGCTGGACAGAATAGTTTATATGAT
GAAGGATACATCTGACATTCTACAAAATGTAGAGCCAACA
ATGTAAATCCGATCAGAGTTTAAAATCAATTGATATTCTG
TCAATATTTACTCACCTTCACTTTATTCCAGACCTGTGTG
CTGTTAGTGTGCTGTGTGTTTGTTTAGCTCTATAAAAACC
ATGTAGCCACTATGCATAATATGCTGCATATATTAAAGGT
TTACACACATATCCCGTTTTTCAAACAAAGAATGTGGTCA
ACCAAAAAGTTGTATCTTGCTGAAGATCAAATATGGCAAT
TTTTTTGCCAATTTTTGCCAATTTCATCAATTATTTTTGA
CAATTTGATCAAATGTGGCAAATTTGATGTTACTTTTTGG
TCGGACTTCAATGACATCATCAGTCATCACTGTTTCTCCT
ATGTCACGTGACAAAATATAATCAGTTGCACGTGTGGCAG
TTTCTGTTTGCCAAGTAGGTGATTTTCGCTGGAAAAAAGC
TACATTTCCGTTTGTTTGGCTATTTTTTTTATTTAATTTT
TTTAAAGCATATTTGTAGAAAAGTGTAAGTTTTGCCGGTT
TTGGAGCTTGACGTGGTCATTATTAACAAAGAAAAAGGCC
TGAATGAAGTTTTTTACTGGATAAATACAGCGACATACAA
TACTGGAATGACACTGGGGTGAGTAAATTTTATAGTTTTG
TTAGGTGGTGAACTGTTTTTCGCTTTAAAATACCTTTAAA
CCGATCCTCGGTTTGCATTGACCAATATTTCGTGTATTGA
CATTCAGGAATGAATTGACATGTATTCTAGTCATCTGGGT
GGCCTCTAGATGTCACTGCTACCCAAGTAAAACTCTAAAA
CCTAATGTTAAGTTAGTTTACGGCGCCCTCTGAGGTCAGC
TTTATGTATTACGTCCTTTACGTCAGCCCATTGTCATCCA
ACAACATTTATCTTTTATGTGAATATGAAGTAGCATTATA
TGACGATGTGCCTTAATTTTGTGACTTTTTTTTTTAAATA
CGCACTGTGAAAAAGAGGAATAAAGTCGGAATGTATGAAG
TTTAA

OTTDART00000048400 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000048400|OTTDARG00000034248|ZDB-GENE-060929-392 cep44|OTTDARP00000037971 CH73-317E19.2-001 LG_ CU928070.7 Danio rerio protein_coding KNOWN, 2165 bp
GTATCCACTGCATAGAAACCAATAACAACAATCTTGAATC
CTTTAGCGGCAAAAACAAAAGGAAGGGATTAGCAATAACT
CCGTTACTAATATTTAGCCTTCGAGATGGCCACTGGTGAC
CTGAAGGGATGTCTCAGAAAACTGGAAGCGTCTCTTCGGT
CTCTGAAGTATCCCAGAGATGTGGATTATCAAAGATTGGC
TGTTGGAGATCCATCAGCGTGTCTTCCTATTGTAAGCTTT
GCCTTCACGTCCTTTTCCCCCTCACTCACAGAGTACCTGG
TCGATTTTGGCGTGGAACTAACCGGAATGAATGATTTGCG
ATTTATTGAGAATGTGTACAAGGTCTTGCGGGATGTTTTC
AGCTATAAACCACTGTTGACCAAACAGCAGTTCCTTCAGT
TTGGGTTTGCAGAGAGGAAAGTGAGCATTCTCTGTGATGT
CATTGGCCTTGTTCTCAGCAAACACAAAGAACTCACTAAA
AATAGCAAGCATCTGAGTAAGCCAAAGAAAAGGCCTGTAT
TGAAGAGCTGTGTTAAAAATGAAATTCCCTCTGATGACAG
TAACTCACAGGAATTAACAGCCCTGATGATGCCTCTGAAG
CAGCCACTGGTAGAAAGGCATCTTGGCGGCAGCTCGGCAG
CAGCTCAAATCAGACACTCCTCAGCTGAACATCCACAGCA
GGAAGAGGAATCAGAAAAGGAGTTAGACAGTGAACGGAGT
GTGTGTTGGAAAGCCGACTGAGAGTTCTGGAAGAAGGTCT
TCTTGAGACTGTTGGCAGACTAGAGCAACGACTGGCTCTC
ATGGAGCTCAAGATACATGCTCTGGAAAAAAGCTTGGCTG
GCAAGATCATCATCGAGAGCAACCAGTGGGAGAACTTGGA
GAGTCGCGTGCTGCTGCTGGAAACCAGGCTGGCGTTGACC
TCAGCACAGGGTCTAACATCAGGAGATGGAATCCTCAGCA
CACAAAACAATGAATTCAAAGAGGATACAGTATCTGCAAA
TGGCTCTTCCGCTGTGATTCAAACATCACTTGATGACAAT
GACAATGGGAACATAGCCAGTCCTTTACCAACAGCTTCAC
AGAGTTTTAAAGAAAGGCTGGACAGAATAGTTTATATGAT
GAAGGATACATCTGACATTCTACAAAATGTAGAGCCAACA
ATGTAAATCCGATCAGAGTTTAAAATCAATTGATATTCTG
TCAATATTTACTCACCTTCACTTTATTCCAGACCTGTGTG
CTGTTAGTGTGCTGTGTGTTTGTTTAGCTCTATAAAAACC
ATGTAGCCACTATGCATAATATGCTGCATATATTAAAGGT
TTACACACATATCCCGTTTTTCAAACAAAGAATGTGGTCA
ACCAAAAAGTTGTATCTTGCTGAAGATCAAATATGGCAAT
TTTTTTGCCAATTTTTGCCAATTTCATCAATTATTTTTGA
CAATTTGATCAAATGTGGCAAATTTGATGTTACTTTTTGG
TCGGACTTCAATGACATCATCAGTCATCACTGTTTCTCCT
ATGTCACGTGACAAAATATAATCAGTTGCACGTGTGGCAG
TTTCTGTTTGCCAAGTAGGTGATTTTCGCTGGAAAAAAGC
TACATTTCCGTTTGTTTGGCTATTTTTTTTATTTAATTTT
TTTAAAGCATATTTGTAGAAAAGTGTAAGTTTTGCCGGTT
TTGGAGCTTGACGTGGTCATTATTAACAAAGAAAAAGGCC
TGAATGAAGTTTTTTACTGGATAAATACAGCGACATACAA
TACTGGAATGACACTGGGGTGAGTAAATTTTATAGTTTTG
TTAGGTGGTGAACTGTTTTTCGCTTTAAAATACCTTTAAA
CCGATCCTCGGTTTGCATTGACCAATATTTCGTGTATTGA
CATTCAGGAATGAATTGACATGTATTCTAGTCATCTGGGT
GGCCTCTAGATGTCACTGCTACCCAAGTAAAACTCTAAAA
CCTAATGTTAAGTTAGTTTACGGCGCCCTCTGAGGTCAGC
TTTATGTATTACGTCCTTTACGTCAGCCCATTGTCATCCA
ACAACATTTATCTTTTATGTGAATATGAAGTAGCATTATA
TGACGATGTGCCTTAATTTTGTGACTTTTTTTTTTAAATA
CGCACTGTGAAAAAGAGGAATAAAGTCGGAATGTATGAAG
TTTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations