Transcript

ottdart00000061150

ID

ZDB-TSCRIPT-141209-2100

Name

ottdart00000061150 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

retained intron

Annotation Method

Ensembl

Associated With Genes

ogfr2 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000163335 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000163335.2|gene_biotype:protein_coding|ENSDARG00000024815.10 transcript_biotype:retained_intron gene_symbol:ogfr2 cdna chromosome:GRCz11:11:20094620:20095481:-1
TCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACAT
GCAAGACTTCCGGCATCGTTGCCTGGTGAGTTTCATTAAC
TTGTATAAGATAAGATATACCTATGTGAGAGAGAGTAAGA
GCCACTTTTAAACTCTTCACTAGGCAAGAAGAGCTAGAGT
TAAAGAGTACAGCCATAAATATGCCTGTTTAAAAAGAAAG
CTTCTGAACACATGACATGATGAAGTATCTCACTGACATG
TCTTTCTCCACTTTCTTTTCTGTCAAATAAACATGCCAGC
TCACATTGGTCCACTGACGTGTGTGGGAAAAATTACAGAT
TTGTTTGTTTGTTTGTCTCTAGGAACTAGATGATGACTAT
GAGGAGGATTATACCATGGAAAAAGAAGATGATGCATTTC
AGATTGTCAGAATTTGCTATTTACAATGTTTATAAACCAT
ATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAATGCT
AGATTTGATTTGTATGAAATGCTTGAGAAATTGTTGCATT
TATTTATATATATATATGTGTGTGTGTGTGTGTGTGTGTG
GGTATATATTGTTGTTGTCATCCCCTAGAATCCCCTATAT
CATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCGCCAG
TCGCTATTCACATTGATGGTTTTCACAAAGACTGGTGGGG
TCAATATGATTTGCTTGAAAAGGCTCACTACTACATTCAA
TGGTAAGTTTCACTTAATCCATTTAAATGTATTTAA

OTTDART00000061150 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000061150|OTTDARG00000042371|ZDB-GENE-030616-523 ogfrl2|no_translation ogfrl2-003 LG_ CU019544.14 Danio rerio protein_coding NOVEL, 756 bp
TCAAGAAGAGTCGCAGGAACATGTATGCAGCCAAGGACAT
GCAAGACTTCCGGCATCGTTGCCTGGTGAGTTTCATTAAC
TTGTATAAGATAAGATATACCTATGTGAGAGAGAGTAAGA
GCCACTTTTAAACTCTTCACTAGGCAAGAAGAGCTAGAGT
TAAAGAGTACAGCCATAAATATGCCTGTTTAAAAAGAAAG
CTTCTGAACACATGACATGATGAAGTATCTCACTGACATG
TCTTTCTCCACTTTCTTTTCTGTCAAATAAACATGCCAGC
TCACATTGGTCCACTGACGTGTGTGGGAAAAATTACAGAT
TTGTTTGTTTGTTTGTCTCTAGGAACTAGATGATGACTAT
GAGGAGGATTATACCATGGAAAAAGAAGATGATGCATTTC
AGATTGTCAGAATTTGCTATTTACAATGTTTATAAACCAT
ATTTTAAAGTATAATTTACCTGCATCTCTGGTGTAATGCT
AGATTTGATTTGTATGAAATGCTTGAGAAATTGTTGCATT
TATTTATATATATATATGTGTGTGTGTGTGTGTGTGTGTG
GGTATATATTGTTGTTGTCATCCCCTAGAATCCCCTATAT
CATCTGAAGTTTTACAGAGGTGAAATAAAAGCTGCGCCAG
TCGCTATTCACATTGATGGTTTTCACAAAGACTGGTGGGG
TCAATATGATTTGCTTGAAAAGGCTCACTACTACATTCAA
TGGTAAGTTTCACTTAATCCATTTAAATGTATTTAA

Related Transcripts

Transcripts related to ogfr2

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	ogfrl2-001 (1)	Havana	578 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-002 (1)	Havana	530 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-004 (1)	Havana	524 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	ogfrl2-201 (1) Ensembl	Ensembl	2,559 nt	Select Tool ZFIN BLAST
ncRNA	ogfrl2-003 (1)	Havana	504 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
ncRNA	ottdart00000061149 (1) Ensembl	Ensembl	1,374 nt	Select Tool ZFIN BLAST
ncRNA	ottdart00000061150	Ensembl	756 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations