Transcript

trpc4a-201

ID
ZDB-TSCRIPT-141209-1479
Name
trpc4a-201 Nomenclature History
Previous Names
  • trpc4a-001
  • dkey-109i21.3-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000080789 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000080789.6|gene_biotype:protein_coding|ENSDARG00000070507.5 transcript_biotype:protein_coding gene_symbol:trpc4a cdna chromosome:GRCz11:10:25829262:25860102:-1
GAGAGAGAGAGAGAATGCAGACAGGACATCTGGTAGCCTT
TGCGCTCCAAGTCTCTTCAATGATCAAAATAACTCTTAAC
GAAAGCTGAGAAAGCGTCACATCAAAGTGTGATGACACCT
GCATGGGAAAGAGAATATGCAAGATGATAGACGATTACAG
ATGTCAGACGCGCACTTTATGGAGGCAACTAACATGTTTG
GCTTTGGGAAACTCTGCAGATTAGCTCCATCTTGAATGCG
AAATGAGAGGATTATTGAGCTTCGCCGCGCGTCCAAATGG
ATATTATTTTCCCGCGTTCTATTTCCATCGTTGCGCATTT
TCGCGCTTTTTTCTCTGTGGAGGCGGTTGGAGCGTAACGG
GTTTTCTACGCGCTGGGCACCTGTTGTACGTTAGTTAGAC
GGAATCAGTCACGAGTCAGTGCAACATCCAAAACCAACAG
CCCCAGTCGACTCACATGAAGGCATAGCAGCAATGTCACA
GCAATACTTTCGCAGAACGGAAAACTTCTTGTACAGGGAC
CGGATCCCGCTGCGGATAGTTCGATCCGAGTCTGAGCTGT
CACCGCTGGAAAAGGCCTACCTGTGGGCTGTGGAGAAAGG
CGACTATGGCAGCGTCAAGCAGGCACTCATAGAAGCCGAG
ATCTACTTCAAAATCAACATCAACTGCATAGATCCTCTGG
GGCGAACGGCTCTGTTGATTGCAATCGAGAACGAGAATCT
GGAAATCATCGAGTTGCTGCTCAGCTTTAACGTGTATGTG
GGGGATGCGCTTTTACACGCCATACGAAAGGAGGTGGTGG
GAGCTGTGGAGCTGCTTTTGAACCACAAGAAGCCCAGCGG
GGGCATGCAGGTACCTCCTATCCTGTTGGACAAGCAGTTT
TCTGATTTTACCCCTGACATCACACCCATAATCTTGGCCG
CACACACCAACAACTATGAGATCATTAAGATGCTGGTACA
GAAAGGTGTCTCCATGCCACAGCCCCACCAGGTGCGCTGT
AACTGCATGGAGTGCGTGTCCAGCTCAGACGTAGACAGCC
TGAGACACTCCCGATCCCGTCTCAACATCTACCGAGCCCT
AGCCAGTCCATCACTTGTCGCCCTCTCCAGCGAGGACCCC
TTCCTGACGGCCTTCCAGCTCAGTTGGGAACTCCAAGAGC
TCAGCAAAGTAGAAAACGAATTCAAGTCGGAGTACGAAGA
GCTTTCCCAGCAGTGTAAACAGTTCGCCAAAGACCTGCTC
GACCAAACACGCAGCTCCAGAGAGCTCGAGCTGATTCTGA
ACTACAAAGATGATATAAATCTTCTGGAGGATGAAGGCAT
TAATGATCTGGCCAGGCTGAAACTGGCCATCAAGTACCAT
CAGAAAGAGTTTGTAGCACAGCCAAACTGTCAGCAGCTGC
TCGCGTCTCGCTGGTATGATGAGTTTCCAGGCTGGAGACG
CCGCCATTGGGCCAGCAAGTTCATGACCTGTATCTTCATC
GGACTTCTCTTCCCTTTCTTCTCACTCTTCTATCTGATCG
CCCCAAAGAGCCACTATGGCTTGTTCATCCGAAAACCCTT
CATAAAGTTTATATGCCACACTGCATCATATCTGACCTTC
CTCTTCCTCCTGCTTTTGGCATCTCAACATGTAAACCGCA
ACCTCCTCGACCAAGACGAGAACTCAGACTGCAAAAACGA
GAACTTAAGGCAGAACCTAGCACCCACCACTGTTGAATGG
ATGATTCTACCCTGGGTTTTAGGATTTGTATGGGCAGAAA
TCAAACAAATGTGGGATGGTGGCTTTCAGGATTACATTCA
CGACTGGTGGAACCTCATGGACTTTGTCATGAATTCTCTA
TATCTGGCCACCATCTCTTTGAAAATTGTTGCTCTCAGCA
AGTATAACAACCAGTGCCGTGACGAATGGGACATGTGGCA
TCCGGCCTTGGTGGGCGAGGCCTTATTCGCCATTGCTAAT
ATATTTAGCTCTCTAAGACTGATTTCACTCTTCACTGCCA
ACTCTCACCTGGGTCCTCTTCAGATTTCCCTGGGCCGAAT
GCTGCTGGACATCCTCAAATTCCTCTTCATTTACTGCTTG
GTGCTGCTCGCCTTTGCAAACGGACTCAATCAGCTTTATT
TCTATTATGAATCCGACGGCAAAACTAGCAACAACGTCAC
ATGCAAGGGTATCCGCTGCTCAGAGCAAAACAATGCATTT
ACAACTATGTTTGAGACACTTCAGTCATTGTTCTGGTCCA
TATTTGGTCTTGTTGCCCTGCATGTGACCAATGTTGATGC
CAAACATGACTTTACTGAGTTTGTTGGAGCCACGATGTTT
GGGACCTACAGCATTATCTCTTTGGTGGTGCTTCTTAATA
TGCTTATTGCCATGATGAATAATTCCTACCAACATATTGC
TGACCATGCTGATATTGAGTGGAAGTTTGCTAGAACAAAA
CTTTGGATGAGCTACTTTGAAGAGGGCGGCACTTTACCTC
CTCCCTTCAACGTCGTCCCAAGCCCAAAATCAGCGTGGTA
CCTCATTAGATGGATAAAGACCCACTGCTTCAAAATTAAA
CAACGAAAAAGAACAGAGACGCTTGGATCACTCGGGATAC
GAGCTGCTGAAAATGTCCGCACAAACTGTCAGTATCAGGA
GGTACTAAGAAACCTGGTTAAACGGTATGTGGCAGCAAGA
ATCAGAGATGCCAAAAAAGAAGAGGGATTAACAGAAGATA
ACTTTAAGGAACTTAAGCAGGACATCTCCAGTTTCCGGTA
CGAGGTGATGGGAATGATGAAGGGCACTAAAACTGGCATG
TCGACCTCAAAAGGAAATACAGCAGAATCAAGCCTTGTGT
ATCCCGAGAACGCTCTGAAGTGTAATTCTACTTCAACTGG
AAGTACCCTGAAGGGCAAAATGAGACTACAGAGCATCACC
AATACCATGATCCAGGAAGGGGGACCCAAAGCCTGGAAAC
CCACTGGCTGTAGCAACCTAGCGGACAGTTCTGTCCCAAA
CAAGAACATTAGCCATCAACTGAACTGCAAAGGGCCAAAC
AACCCAGGGGAAATGTACTCCGTATCAGAGGAAGCCGGTG
AATCTGAGAGCGAGGAACAGGGCGATGGAAAACAAGCAGA
AAACCTTGATTGCAAGAAAAAAAAGAACCAAAACAAAGAA
ACTGAGAAGGATGGAGTGAATAATGATGTGGAGGAAGATG
AGGAATTGACGTACATGCGTTATATGTGTGAGGAAGAAAT
GAATGAAGGAAATGAAGGTGAAACTAGCAGATTATAACAG
TATTAAAAGTGAAGAGGAAGAAGAAGTTTGTTCTCTTGAC
CTCAGAGTTCAACTGTGGTGAAGGTAAAGTGCAGGGTGAT
GATCCAAAAATCAAGTTTTGTTGTTTGGGAGTCTCAGGGA
TGATTGTCTCTTTTAGGAGAATACGGGGTTCAGCGTTGTC
ATTCACAGTGATTTACACTCAGTCAAGTGTGACACTCCTG
TAGTTTTTCGCTGCTCTGCTCCTCTTTCATATACAGTATG
GAGGAGCGTTAGCCCACTTTTTGCGACCTTTCATTCTGCC
TTACTCCGTTAGATTTACCTGTAGTTCCAGCCCATTCTCA
CAAGGAAACGTAACTATTTTACGTATTGTCAGAAAAGTGG
CTAATGTGTACAAATTCATACAATTGAATTCGGATTAAAA
CGTACCATTTTTTAAAAAGAGGTATGCCCACAATCCCCAC
CCCTATCTCTCATTGTGGGATGAGCAAACACTGCTAAAAA
GTATGAATGAGATTGAACTAATGATTACGAATTAGCTACT
AAATCAAAAAGTTACGAATTGCCACGAGATTTTGTTGGTA
GGTCCAACATAAAAAAGATGTCATTTCTGTCATGCAACCT
AATATCTTTAATAAAGGTTACTATGCAATTATTTACAACT
TTTTAAACTTTTTAGTCGCATTTTACATTGCCCATGAGGC
AACTGTGTGAGAAAAGAAGCAGGTTGAAGGGTGTCTTTTT
TATAAACGTGGATAAAGTCCAAAGTAAACACTACATATCA
TAAAATCAACACACTGTAAAATTGTGTTACAGTAATCATG
TATGTTTCATCCTCTCATTTGTATTTACAAGGGTTTGGAG
AACACTGTATTGCAACAATGGTACATTCTTTTATGCATCT
GAACGTCATATTCCATCTATCCTCGTTGTTTACATGATAG
GTTACTGCCTTGTGTTACCGATCTTGCATAAATGCACAAA
TATAAATAAATATATGCTGTACTATGACTCACTATTATTG
TGATTTTG

OTTDART00000047335 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000047335|OTTDARG00000033627|ZDB-GENE-131217-1 trpc4a|OTTDARP00000037192 DKEY-109I21.3-001 LG_ BX511008.19 Danio rerio protein_coding NOVEL, 4288 bp
GAGAGAGAGAGAGAATGCAGACAGGACATCTGGTAGCCTT
TGCGCTCCAAGTCTCTTCAATGATCAAAATAACTCTTAAC
GAAAGCTGAGAAAGCGTCACATCAAAGTGTGATGACACCT
GCATGGGAAAGAGAATATGCAAGATGATAGACGATTACAG
ATGTCAGACGCGCACTTTATGGAGGCAACTAACATGTTTG
GCTTTGGGAAACTCTGCAGATTAGCTCCATCTTGAATGCG
AAATGAGAGGATTATTGAGCTTCGCCGCGCGTCCAAATGG
ATATTATTTTCCCGCGTTCTATTTCCATCGTTGCGCATTT
TCGCGCTTTTTTCTCTGTGGAGGCGGTTGGAGCGTAACGG
GTTTTCTACGCGCTGGGCACCTGTTGTACGTTAGTTAGAC
GGAATCAGTCACGAGTCAGTGCAACATCCAAAACCAACAG
CCCCAGTCGACTCACATGAAGGCATAGCAGCAATGTCACA
GCAATACTTTCGCAGAACGGAAAACTTCTTGTACAGGGAC
CGGATCCCGCTGCGGATAGTTCGATCCGAGTCTGAGCTGT
CACCGCTGGAAAAGGCCTACCTGTGGGCTGTGGAGAAAGG
CGACTATGGCAGCGTCAAGCAGGCACTCATAGAAGCCGAG
ATCTACTTCAAAATCAACATCAACTGCATAGATCCTCTGG
GGCGAACGGCTCTGTTGATTGCAATCGAGAACGAGAATCT
GGAAATCATCGAGTTGCTGCTCAGCTTTAACGTGTATGTG
GGGGATGCGCTTTTACACGCCATACGAAAGGAGGTGGTGG
GAGCTGTGGAGCTGCTTTTGAACCACAAGAAGCCCAGCGG
GGGCATGCAGGTACCTCCTATCCTGTTGGACAAGCAGTTT
TCTGATTTTACCCCTGACATCACACCCATAATCTTGGCCG
CACACACCAACAACTATGAGATCATTAAGATGCTGGTACA
GAAAGGTGTCTCCATGCCACAGCCCCACCAGGTGCGCTGT
AACTGCATGGAGTGCGTGTCCAGCTCAGACGTAGACAGCC
TGAGACACTCCCGATCCCGTCTCAACATCTACCGAGCCCT
AGCCAGTCCATCACTTGTCGCCCTCTCCAGCGAGGACCCC
TTCCTGACGGCCTTCCAGCTCAGTTGGGAACTCCAAGAGC
TCAGCAAAGTAGAAAACGAATTCAAGTCGGAGTACGAAGA
GCTTTCCCAGCAGTGTAAACAGTTCGCCAAAGACCTGCTC
GACCAAACACGCAGCTCCAGAGAGCTCGAGCTGATTCTGA
ACTACAAAGATGATATAAATCTTCTGGAGGATGAAGGCAT
TAATGATCTGGCCAGGCTGAAACTGGCCATCAAGTACCAT
CAGAAAGAGTTTGTAGCACAGCCAAACTGTCAGCAGCTGC
TCGCGTCTCGCTGGTATGATGAGTTTCCAGGCTGGAGACG
CCGCCATTGGGCCAGCAAGTTCATGACCTGTATCTTCATC
GGACTTCTCTTCCCTTTCTTCTCACTCTTCTATCTGATCG
CCCCAAAGAGCCACTATGGCTTGTTCATCCGAAAACCCTT
CATAAAGTTTATATGCCACACTGCATCATATCTGACCTTC
CTCTTCCTCCTGCTTTTGGCATCTCAACATGTAAACCGCA
ACCTCCTCGACCAAGACGAGAACTCAGACTGCAAAAACGA
GAACTTAAGGCAGAACCTAGCACCCACCACTGTTGAATGG
ATGATTCTACCCTGGGTTTTAGGATTTGTATGGGCAGAAA
TCAAACAAATGTGGGATGGTGGCTTTCAGGATTACATTCA
CGACTGGTGGAACCTCATGGACTTTGTCATGAATTCTCTA
TATCTGGCCACCATCTCTTTGAAAATTGTTGCTCTCAGCA
AGTATAACAACCAGTGCCGTGACGAATGGGACATGTGGCA
TCCGGCCTTGGTGGGCGAGGCCTTATTCGCCATTGCTAAT
ATATTTAGCTCTCTAAGACTGATTTCACTCTTCACTGCCA
ACTCTCACCTGGGTCCTCTTCAGATTTCCCTGGGCCGAAT
GCTGCTGGACATCCTCAAATTCCTCTTCATTTACTGCTTG
GTGCTGCTCGCCTTTGCAAACGGACTCAATCAGCTTTATT
TCTATTATGAATCCGACGGCAAAACTAGCAACAACGTCAC
ATGCAAGGGTATCCGCTGCTCAGAGCAAAACAATGCATTT
ACAACTATGTTTGAGACACTTCAGTCATTGTTCTGGTCCA
TATTTGGTCTTGTTGCCCTGCATGTGACCAATGTTGATGC
CAAACATGACTTTACTGAGTTTGTTGGAGCCACGATGTTT
GGGACCTACAGCATTATCTCTTTGGTGGTGCTTCTTAATA
TGCTTATTGCCATGATGAATAATTCCTACCAACATATTGC
TGACCATGCTGATATTGAGTGGAAGTTTGCTAGAACAAAA
CTTTGGATGAGCTACTTTGAAGAGGGCGGCACTTTACCTC
CTCCCTTCAACGTCGTCCCAAGCCCAAAATCAGCGTGGTA
CCTCATTAGATGGATAAAGACCCACTGCTTCAAAATTAAA
CAACGAAAAAGAACAGAGACGCTTGGATCACTCGGGATAC
GAGCTGCTGAAAATGTCCGCACAAACTGTCAGTATCAGGA
GGTACTAAGAAACCTGGTTAAACGGTATGTGGCAGCAAGA
ATCAGAGATGCCAAAAAAGAAGAGGGATTAACAGAAGATA
ACTTTAAGGAACTTAAGCAGGACATCTCCAGTTTCCGGTA
CGAGGTGATGGGAATGATGAAGGGCACTAAAACTGGCATG
TCGACCTCAAAAGGAAATACAGCAGAATCAAGCCTTGTGT
ATCCCGAGAACGCTCTGAAGTGTAATTCTACTTCAACTGG
AAGTACCCTGAAGGGCAAAATGAGACTACAGAGCATCACC
AATACCATGATCCAGGAAGGGGGACCCAAAGCCTGGAAAC
CCACTGGCTGTAGCAACCTAGCGGACAGTTCTGTCCCAAA
CAAGAACATTAGCCATCAACTGAACTGCAAAGGGCCAAAC
AACCCAGGGGAAATGTACTCCGTATCAGAGGAAGCCGGTG
AATCTGAGAGCGAGGAACAGGGCGATGGAAAACAAGCAGA
AAACCTTGATTGCAAGAAAAAAAAGAACCAAAACAAAGAA
ACTGAGAAGGATGGAGTGAATAATGATGTGGAGGAAGATG
AGGAATTGACGTACATGCGTTATATGTGTGAGGAAGAAAT
GAATGAAGGAAATGAAGGTGAAACTAGCAGATTATAACAG
TATTAAAAGTGAAGAGGAAGAAGAAGTTTGTTCTCTTGAC
CTCAGAGTTCAACTGTGGTGAAGGTAAAGTGCAGGGTGAT
GATCCAAAAATCAAGTTTTGTTGTTTGGGAGTCTCAGGGA
TGATTGTCTCTTTTAGGAGAATACGGGGTTCAGCGTTGTC
ATTCACAGTGATTTACACTCAGTCAAGTGTGACACTCCTG
TAGTTTTTCGCTGCTCTGCTCCTCTTTCATATACAGTATG
GAGGAGCGTTAGCCCACTTTTTGCGACCTTTCATTCTGCC
TTACTCCGTTAGATTTACCTGTAGTTCCAGCCCATTCTCA
CAAGGAAACGTAACTATTTTACGTATTGTCAGAAAAGTGG
CTAATGTGTACAAATTCATACAATTGAATTCGGATTAAAA
CGTACCATTTTTTAAAAAGAGGTATGCCCACAATCCCCAC
CCCTATCTCTCATTGTGGGATGAGCAAACACTGCTAAAAA
GTATGAATGAGATTGAACTAATGATTACGAATTAGCTACT
AAATCAAAAAGTTACGAATTGCCACGAGATTTTGTTGGTA
GGTCCAACATAAAAAAGATGTCATTTCTGTCATGCAACCT
AATATCTTTAATAAAGGTTACTATGCAATTATTTACAACT
TTTTAAACTTTTTAGTCGCATTTTACATTGCCCATGAGGC
AACTGTGTGAGAAAAGAAGCAGGTTGAAGGGTGTCTTTTT
TATAAACGTGGATAAAGTCCAAAGTAAACACTACATATCA
TAAAATCAACACACTGTAAAATTGTGTTACAGTAATCATG
TATGTTTCATCCTCTCATTTGTATTTACAAGGGTTTGGAG
AACACTGTATTGCAACAATGGTACATTCTTTTATGCATCT
GAACGTCATATTCCATCTATCCTCGTTGTTTACATGATAG
GTTACTGCCTTGTGTTACCGATCTTGCATAAATGCACAAA
TATAAATAAATATATGCTGTACTATGACTCACTATTATTG
TGATTTTG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations