Transcript

cachd1-202

ID
ZDB-TSCRIPT-131113-544
Name
cachd1-202 Nomenclature History
Previous Names
  • cachd1-001
  • dkey-11h7.1-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000153988 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000153988.3|gene_biotype:protein_coding|ENSDARG00000061590.8 transcript_biotype:protein_coding gene_symbol:cachd1 cdna chromosome:GRCz11:6:31590751:31682135:-1
AGAATCTTCAACTCCTTTGTTTATACAGAGAAGACTTCAA
ATGGTGAAACAGAGGTGCAGCAGCTAGCGAAAAAGATCCG
AGAGAAGTTTAACCGGTACCTGGATGTGGTGAACAGGAAC
AAGCAGGTGGTGGAAGCTTCATACACGGCCCACCTCACTT
CACCTCTCACAGCCATACAGGACTGCTGCTCCATCCCTCC
CTCCATGATGGAATTTGACGGTAATTTTAATGCCAATGTT
TCCAAGACCGTCAGCTGTGATCGTCTCTCCCCTACCGTCA
ATAGCAGAGCTTTCAACCCAGGACGAGACCTCAACTCTGT
GCTGGCAGACAACCTGAAGTCCAATCCAGGGATCAAGTGG
CAGTACTTCAGCTCAGAGGAGGGCATTTTCACTCTGTTTC
CTGCTCACAAGTTCCACTGCAAGGGCACTTTTGAGCACAG
GAGCAGGCCTGTGTATGTCGCGGCAGTAAGGCCACAATCC
AAGCATATCGTGGTGATTATAGACCATGGTGCATCTGTCA
CCGAAACCCAGCTCCAGATTGCTCGAGATGCTGCTCTGGT
CATCCTCAACTCCATCGACGAACATGATAAAATCTCAGTG
TTGACGATAGCAGATACTGTTCGCTCCTGCTCTCTGGATC
AGTGCTATAAGAGCTTCCTCTCACCTGCTACCAGCGAGAC
TAAGAGGAAGATGAGCACCTTCATCAGCAACATTAAAGCT
TCTGACAGCTCTACCCAGCATGCAGTGGGCTTCCAGAAGG
CCTTTCAGTTGTTGAGGAATACAAGCAACGTCACCAGACA
GCTGACTAACACTGACATGATGATAATCTACCTGTCGTCG
GGCATCACCTCCCGAGACTCATCTGAGCATGAAAAGAGAG
CAACTCTGAGCGCAGTGAAAGAGGAGAACCGGCACCTCAA
CAACTCCGTCATGATCCTCACCTACGCTCTCATGAACGAT
GGAGTGACTGGACTGAAGGAGCTGGCATTCTTGCGAGACC
TGGCTGAGCAGAATTCCCTGAAGTACGGCGTTCAGGATCG
ATCTGCACTGCCCGTGGTAAAGGGAAGTATGATGGTTCTG
AACCAGCTCAGTAATCTGGAGACCACAGTGGGCCGCTTCT
ACATCAACCTCCCCAACCGAATGATCGACGTGGCCACCTT
CAGCTTGCCTTATGCGGACCAGATGGGAGACGGTTTTATC
ATGACCGTCAGCCGGCCGTGCTACTTTGGTAACTTGTTAC
TGGGTGTGGTTGGAGTGGATGTGAACCTGGCATACATACT
GGAGGACGTTACCTACTACCAGGACTCCCTGGCCTCATAT
ACATTCCTCATAGACAACAAAGGCTACACTCTCATGCATC
CATCACTCACCCGTCCTTACCTGATGACTGAAGCGCCTCT
TCATACAGACATCATCCACTATGAGAACATCCCAGGGTTT
CCTGTTGTGCGTCAGAACATCCTCAGTCTGCCTCTGGGGA
GTCAGGTCATTGCTGTGCCTGTCAACTCTTCTCTGTCTTG
GCACATGAACCGCCTCCGTGATCCTAATCGAGATGCCTAC
AATGTTAGCTATGCTTGGAAACTGGTTCAGGACACTTCGT
TTATCCTCTGCATAGTTTATGTTCAGCCAGAGATCCCGGT
GAAGCAGCTGAAAAATCTGAACACAGCCCCCAGCAGCAAA
CTTCTCTACCACCGCCTGGATCTGCTGGGGCAGCCCAGCT
CCTGCCTTCACTTTAAACAGCTCGCTACAGTCGAGAGCCC
TACGGTGATGTTGTCCGCTGGTAGTTTCTCCTCTCCCTAT
GAGCACCTGAGTCAACCAGAGACCAAGCGTATGGTGGAGC
ACTACACTGCTTACCTGAGCGACAACACTCGACTTATAGC
CAACCCCGGCCTGAAGTCTTCTGTGAGGAATGAGGTGATG
GCCACCAGCCACGTGACTGATGAATGGATGAGTCTTATGG
AGATGAGCAGCCTCAACTGCTACATTGTGAGGCGTTACAT
AGCAACGCCCAATGGGGTGCTGCGGATTTACCCCGGTTCA
CTCATGGACAAAGCCTTCGATCCCACCAGGAGGCAATGGT
ACCTACATGCTGTAGCCAATCCTGGTCTCATCACTTTTAC
TGGACCGTACCTGGATGTTGGTGGGGCAGGTTATGTAGTC
ACCATTAGCCACACCATCCACGCCCCTAGTTCCCAAATGG
CCTCTGGTTACACAGTAGCGGTAATGGGCATTGACTTCAC
CCTGCGCTACTTCTACAAAGTTCTGTTGGATCTTCTTCCC
ATCTGCAACCAGGACAAAGGCAACAAAATTCGGTGTTTTA
TCATGGAGGACAGAGGCTATTTGGTGGCCCATCCGACACT
GATTGATCCGAAGGGTCACGCTCCTGCAGAACAACAGCAT
ATTACGCATAAGGAGCCTCTAGTGGCCAATGATATTCTCA
ACCACCCCAATTTTGTGAAGAAAAACCTGTGTAACAGTTT
CAGCGATCGCACTGTGCAGCGTTTCTACAAGTTCAACACA
AGCATCGTGGGTGATCTGACAAACCTTGTGCATGGCAGTC
ACTGCTCAAAGTACCGGCTTACTCGTATCCCAGGAACGAA
TGCGTTTGCTGGTATTGTGAATGAGACGTGTGATGCGCTG
GCCTTCTGTGCTTGCAGTACTGTGGACCGTCTCTGCCTCA
ACTGCCACAGAATGGAGCAGAATGAATGTGAGTGCCCCTG
TGAATGCCCTCTAGAGGTGAACGAGTGTACTGGCAACCTC
ACCAACGCTGAGAACAGAAATCCGAGCTGTGACGTGCACC
AGGAGCCTTTGTCTTTGACTGTAATTGAGCCCAGTCTACA
GGATACTCTGCCACAGTGCATCAACACCAGATGCAGCCAG
CGCTTTACCAGCAGTGACTGTTTTGGTGTTCTGGACTGTG
AGTGGTGTATGGTGGACAGCGATGGAAAGACTCACCTGGA
TAAGCCTTACTGTGCCCTGCAGAAGGAGTGTTTCGGAGGC
ATAGTGGGCGCCAAGAGTCCTTATGTGGATGGAATGGGCA
TTTTAGATGAGGAGTTGGCTTCGCTGAACATGATCAAGAG
TGCTCCTGTGGGCCCTGTGGCTGGAGGGATTATGGGATGC
ATCATGGTTTTGGTGTTGGCAGTTTATGCCTATAGGCACC
AGATCCACCGTCGCAGTCATCAGCACATGTCACCGCTGGC
CGCACAGGAAATGTCTGTGCGGATGTCCAACCTGGACAAC
GAGCGAGATGACAGAGATGAAGACAGCCACGAAGACAGAG
GAATAATCAGCAACACTCGATTCATTGCTGCAGTTATTGA
GAGGCACACACACAGTCCAGAACGACGGCGGAGATACTGG
GGCCGGTCAGGGACTGAAAGTGACCACGGTTACAGTACCA
TGAGCCCTCAGGAGGACAGTGAGAACCCGCCCTGCAATAA
CGATCCTCTCTCAGCGGGCGTTGATGTGGGCAATCACGAC
GAGGACCTTGACCTGGACACTCCTCCACAGACAGCTGCTC
TTCTCAGCCACAAATTCCACCCCTATCGGCACCCCCACAT
GCACCACCCCCTGCATCTGCACACACACCACCTTCAGGCC
GCCGTAACCGTTCACAGTGTGGACGCTGAGTGCTGATCCT
GTCCAGCCGTGACCTCAGAACCAACCCTCAACCCTGCCCT
CACCACCACCACCAATATCCAACACCAACCAACCCTTCAA
GAAGAGGAGAACCTGAACTGCCTGCTCCTCTATAGGCGAA
CATTTGACCTCTGTAGAGGTTGTGCGGGAGTGGATTTGGC
AGGTACATACGATACAGCTTTGTTCTTTTTCAAAAAACAA
TGAAGATGAAAGGATTATTTTTCTACTATTTATTTAACAG
GAGATAAATGAATGAAAAAAAAGATAGACTGAATCTGTCA
GCTTTTCTCAGGCCCGTAAAGGTCTTTTTAGTACCCAGCC
CTGGTTTTGTCTTCAACTAGACTGCACAGCAGCTTTTGAA
GGATTCAATTCATGGCACATTTTGAATTTCTCGTGGGGAG
AGTAAACAAAACATTTCAACGAACAATAGATGCGAATGCC
ACATCAAGGAGACGTGAAAATGTGGCGTATTCTTGAGGAG
CTGTCACTCTCTGGATTGTTTTTGGTTTCTTTTTTTATGG
TGAATCTCAAGACAATGTTCTGTGTGACCAAGGTGTCGGG
CTACAACCCCAGTGTGGGATATTAGACTTGTTTTATTATT
TTAAAAGATGACTGGGAGAGAAGACTATGCTCAGTCCTGC
TACTGTGTGTATAAGCTCTCGTCGTGTTTCTGATTCTTTT
GCATTTGGTGTACGAGAGAATGAGAGAAGCCGAGTGTGCA
TGTTTTGGTGCTTGTGTACGTAATTGTGTGTGTGCGCGTG
TGTGTGAATGAGATGGATGTTTGATGGTACAGATGGATCA
TCTCCATTAATGGTGTCTTCTTTTTTTAAGTCATTAGTCA
GTATTGATGGAATGCCATGACATTTTTTCAGATCCTTCTA
AACCCATGTGCACTTTTTTTTCCTCAGCTGCTCGTCTGCT
GATATGTAGACATCGTGCTCCTATGATTTTAGAGGGATTG
TGTCTATTGTTTTCAGAATGAAATGATATACCATGTATAT
ACATCTAAAGTTTAACAAAGTAGCTATAAATGTGTCATAC
ACTACAAACCTTT

OTTDART00000054688 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000054688|OTTDARG00000038167|ZDB-GENE-100819-3 cachd1|OTTDARP00000042932 DKEY-11H7.1-001 LG_ BX663603.13 Danio rerio protein_coding NOVEL, 4693 bp
AGAATCTTCAACTCCTTTGTTTATACAGAGAAGACTTCAA
ATGGTGAAACAGAGGTGCAGCAGCTAGCGAAAAAGATCCG
AGAGAAGTTTAACCGGTACCTGGATGTGGTGAACAGGAAC
AAGCAGGTGGTGGAAGCTTCATACACGGCCCACCTCACTT
CACCTCTCACAGCCATACAGGACTGCTGCTCCATCCCTCC
CTCCATGATGGAATTTGACGGTAATTTTAATGCCAATGTT
TCCAAGACCGTCAGCTGTGATCGTCTCTCCCCTACCGTCA
ATAGCAGAGCTTTCAACCCAGGACGAGACCTCAACTCTGT
GCTGGCAGACAACCTGAAGTCCAATCCAGGGATCAAGTGG
CAGTACTTCAGCTCAGAGGAGGGCATTTTCACTCTGTTTC
CTGCTCACAAGTTCCACTGCAAGGGCACTTTTGAGCACAG
GAGCAGGCCTGTGTATGTCGCGGCAGTAAGGCCACAATCC
AAGCATATCGTGGTGATTATAGACCATGGTGCATCTGTCA
CCGAAACCCAGCTCCAGATTGCTCGAGATGCTGCTCTGGT
CATCCTCAACTCCATCGACGAACATGATAAAATCTCAGTG
TTGACGATAGCAGATACTGTTCGCTCCTGCTCTCTGGATC
AGTGCTATAAGAGCTTCCTCTCACCTGCTACCAGCGAGAC
TAAGAGGAAGATGAGCACCTTCATCAGCAACATTAAAGCT
TCTGACAGCTCTACCCAGCATGCAGTGGGCTTCCAGAAGG
CCTTTCAGTTGTTGAGGAATACAAGCAACGTCACCAGACA
GCTGACTAACACTGACATGATGATAATCTACCTGTCGTCG
GGCATCACCTCCCGAGACTCATCTGAGCATGAAAAGAGAG
CAACTCTGAGCGCAGTGAAAGAGGAGAACCGGCACCTCAA
CAACTCCGTCATGATCCTCACCTACGCTCTCATGAACGAT
GGAGTGACTGGACTGAAGGAGCTGGCATTCTTGCGAGACC
TGGCTGAGCAGAATTCCCTGAAGTACGGCGTTCAGGATCG
ATCTGCACTGCCCGTGGTAAAGGGAAGTATGATGGTTCTG
AACCAGCTCAGTAATCTGGAGACCACAGTGGGCCGCTTCT
ACATCAACCTCCCCAACCGAATGATCGACGTGGCCACCTT
CAGCTTGCCTTATGCGGACCAGATGGGAGACGGTTTTATC
ATGACCGTCAGCCGGCCGTGCTACTTTGGTAACTTGTTAC
TGGGTGTGGTTGGAGTGGATGTGAACCTGGCATACATACT
GGAGGACGTTACCTACTACCAGGACTCCCTGGCCTCATAT
ACATTCCTCATAGACAACAAAGGCTACACTCTCATGCATC
CATCACTCACCCGTCCTTACCTGATGACTGAAGCGCCTCT
TCATACAGACATCATCCACTATGAGAACATCCCAGGGTTT
CCTGTTGTGCGTCAGAACATCCTCAGTCTGCCTCTGGGGA
GTCAGGTCATTGCTGTGCCTGTCAACTCTTCTCTGTCTTG
GCACATGAACCGCCTCCGTGATCCTAATCGAGATGCCTAC
AATGTTAGCTATGCTTGGAAACTGGTTCAGGACACTTCGT
TTATCCTCTGCATAGTTTATGTTCAGCCAGAGATCCCGGT
GAAGCAGCTGAAAAATCTGAACACAGCCCCCAGCAGCAAA
CTTCTCTACCACCGCCTGGATCTGCTGGGGCAGCCCAGCT
CCTGCCTTCACTTTAAACAGCTCGCTACAGTCGAGAGCCC
TACGGTGATGTTGTCCGCTGGTAGTTTCTCCTCTCCCTAT
GAGCACCTGAGTCAACCAGAGACCAAGCGTATGGTGGAGC
ACTACACTGCTTACCTGAGCGACAACACTCGACTTATAGC
CAACCCCGGCCTGAAGTCTTCTGTGAGGAATGAGGTGATG
GCCACCAGCCACGTGACTGATGAATGGATGAGTCTTATGG
AGATGAGCAGCCTCAACTGCTACATTGTGAGGCGTTACAT
AGCAACGCCCAATGGGGTGCTGCGGATTTACCCCGGTTCA
CTCATGGACAAAGCCTTCGATCCCACCAGGAGGCAATGGT
ACCTACATGCTGTAGCCAATCCTGGTCTCATCACTTTTAC
TGGACCGTACCTGGATGTTGGTGGGGCAGGTTATGTAGTC
ACCATTAGCCACACCATCCACGCCCCTAGTTCCCAAATGG
CCTCTGGTTACACAGTAGCGGTAATGGGCATTGACTTCAC
CCTGCGCTACTTCTACAAAGTTCTGTTGGATCTTCTTCCC
ATCTGCAACCAGGACAAAGGCAACAAAATTCGGTGTTTTA
TCATGGAGGACAGAGGCTATTTGGTGGCCCATCCGACACT
GATTGATCCGAAGGGTCACGCTCCTGCAGAACAACAGCAT
ATTACGCATAAGGAGCCTCTAGTGGCCAATGATATTCTCA
ACCACCCCAATTTTGTGAAGAAAAACCTGTGTAACAGTTT
CAGCGATCGCACTGTGCAGCGTTTCTACAAGTTCAACACA
AGCATCGTGGGTGATCTGACAAACCTTGTGCATGGCAGTC
ACTGCTCAAAGTACCGGCTTACTCGTATCCCAGGAACGAA
TGCGTTTGCTGGTATTGTGAATGAGACGTGTGATGCGCTG
GCCTTCTGTGCTTGCAGTACTGTGGACCGTCTCTGCCTCA
ACTGCCACAGAATGGAGCAGAATGAATGTGAGTGCCCCTG
TGAATGCCCTCTAGAGGTGAACGAGTGTACTGGCAACCTC
ACCAACGCTGAGAACAGAAATCCGAGCTGTGACGTGCACC
AGGAGCCTTTGTCTTTGACTGTAATTGAGCCCAGTCTACA
GGATACTCTGCCACAGTGCATCAACACCAGATGCAGCCAG
CGCTTTACCAGCAGTGACTGTTTTGGTGTTCTGGACTGTG
AGTGGTGTATGGTGGACAGCGATGGAAAGACTCACCTGGA
TAAGCCTTACTGTGCCCTGCAGAAGGAGTGTTTCGGAGGC
ATAGTGGGCGCCAAGAGTCCTTATGTGGATGGAATGGGCA
TTTTAGATGAGGAGTTGGCTTCGCTGAACATGATCAAGAG
TGCTCCTGTGGGCCCTGTGGCTGGAGGGATTATGGGATGC
ATCATGGTTTTGGTGTTGGCAGTTTATGCCTATAGGCACC
AGATCCACCGTCGCAGTCATCAGCACATGTCACCGCTGGC
CGCACAGGAAATGTCTGTGCGGATGTCCAACCTGGACAAC
GAGCGAGATGACAGAGATGAAGACAGCCACGAAGACAGAG
GAATAATCAGCAACACTCGATTCATTGCTGCAGTTATTGA
GAGGCACACACACAGTCCAGAACGACGGCGGAGATACTGG
GGCCGGTCAGGGACTGAAAGTGACCACGGTTACAGTACCA
TGAGCCCTCAGGAGGACAGTGAGAACCCGCCCTGCAATAA
CGATCCTCTCTCAGCGGGCGTTGATGTGGGCAATCACGAC
GAGGACCTTGACCTGGACACTCCTCCACAGACAGCTGCTC
TTCTCAGCCACAAATTCCACCCCTATCGGCACCCCCACAT
GCACCACCCCCTGCATCTGCACACACACCACCTTCAGGCC
GCCGTAACCGTTCACAGTGTGGACGCTGAGTGCTGATCCT
GTCCAGCCGTGACCTCAGAACCAACCCTCAACCCTGCCCT
CACCACCACCACCAATATCCAACACCAACCAACCCTTCAA
GAAGAGGAGAACCTGAACTGCCTGCTCCTCTATAGGCGAA
CATTTGACCTCTGTAGAGGTTGTGCGGGAGTGGATTTGGC
AGGTACATACGATACAGCTTTGTTCTTTTTCAAAAAACAA
TGAAGATGAAAGGATTATTTTTCTACTATTTATTTAACAG
GAGATAAATGAATGAAAAAAAAGATAGACTGAATCTGTCA
GCTTTTCTCAGGCCCGTAAAGGTCTTTTTAGTACCCAGCC
CTGGTTTTGTCTTCAACTAGACTGCACAGCAGCTTTTGAA
GGATTCAATTCATGGCACATTTTGAATTTCTCGTGGGGAG
AGTAAACAAAACATTTCAACGAACAATAGATGCGAATGCC
ACATCAAGGAGACGTGAAAATGTGGCGTATTCTTGAGGAG
CTGTCACTCTCTGGATTGTTTTTGGTTTCTTTTTTTATGG
TGAATCTCAAGACAATGTTCTGTGTGACCAAGGTGTCGGG
CTACAACCCCAGTGTGGGATATTAGACTTGTTTTATTATT
TTAAAAGATGACTGGGAGAGAAGACTATGCTCAGTCCTGC
TACTGTGTGTATAAGCTCTCGTCGTGTTTCTGATTCTTTT
GCATTTGGTGTACGAGAGAATGAGAGAAGCCGAGTGTGCA
TGTTTTGGTGCTTGTGTACGTAATTGTGTGTGTGCGCGTG
TGTGTGAATGAGATGGATGTTTGATGGTACAGATGGATCA
TCTCCATTAATGGTGTCTTCTTTTTTTAAGTCATTAGTCA
GTATTGATGGAATGCCATGACATTTTTTCAGATCCTTCTA
AACCCATGTGCACTTTTTTTTCCTCAGCTGCTCGTCTGCT
GATATGTAGACATCGTGCTCCTATGATTTTAGAGGGATTG
TGTCTATTGTTTTCAGAATGAAATGATATACCATGTATAT
ACATCTAAAGTTTAACAAAGTAGCTATAAATGTGTCATAC
ACTACAAACCTTT

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations