Transcript

atg4b-202

ID
ZDB-TSCRIPT-131113-530
Name
atg4b-202 Nomenclature History
Previous Names
  • atg4b-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000154161 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000154161.2|gene_biotype:protein_coding|ENSDARG00000052104.8 transcript_biotype:nonsense_mediated_decay gene_symbol:atg4b cdna chromosome:GRCz11:6:27092137:27104946:1
CAGCTACTCTCACATACGATTCATTGCGCTTTGGAGAGAT
CGAAGATTTCCCAGAGACCTCTGATCCTGTCTGGATTTTG
GGAAAGCAGTTCAGCGCTCTAACAGAGAAGGATGATATTC
TGGCAGATGTCACCTCACGTTTATGGTTCACGTACAGAAA
AAACTTCCAGCCAATTGGTGGCACTGGGCCCACTTCAGAC
ACCGGCTGGGGCTGCATGCTTCGATGCGGACAGATGATTC
TTGGGGAGGCTTTGATCTGCAGGCACTTAGGCAGAGAGAG
GTTGTGTATGCCATGGCTGGATTTCGACAGGGGTGCATGT
GCCGTTTCTGAAGAGCCTCGAGAGATGAATGGAGATCTGG
AAGGAGCTTGTGCTTTGGCCGAGGAGGAGACGGCTCTGTG
GAAACCCCTTGTTCTGCTGATTCCTCTAAGACTGGGCCTC
AGTGACATCAATGAAGCCTATATTGAACCACTCAAGGTGA
CGAGCTCATTTATCTAGACCCTCACACCACTCAGCCAGCA
GTGGACCCCAGTGAAGACGGCCATTTCCCAGACGACTCAT
ACCACTGCCAGCACCCTCCATGCCGGATGCACATCTGTGA
GCTCGACCCTTCTATTGCTGCTGGCTTCTTCTGCCAAACT
GAGGATGATTTTGATGACTGGTGTGCACAGATTCGTAAGG
TTTCAAACTGCAGAGGTCTTCCCATGTTTGAATTAGTAGA
CAGTCAACCATCTCATCTAATCACCGCTGATGTACTTAAT
CTCACTCCAGATTTTTCAGATTCAGATCGACTCGAGCGCT
TCTTTGATTCTGAGGATGAAGAATTTGAAATCCTGTCTTT
GTGAAGAACGGTTAGATTTGCCAGACTTTAAGAATTCTGT
GGTAGATCTTCCCTTAAGAGGACAGAGAAGAACACCGTTG
ACGTTCAAGGCCACTGTGGCAAACACACAGCTTTCTTCTT
CAACAGCTCCACTGACTGCTTTGTGAGTGAGCCGAGGTCA
GGTGTCGCGTCACAGGCACTCAGGATCATCAGTATGTATG
TACTTAGCCGCATTTATGTGTATCCACATTGAGTCTTAAC
ACTATTGATTCATTTTTAAGTGATATGGTGCCTTTTTACC
CCCTTAACTTAAAACACAGGTTTGCCATAACACATTTTAT
GGTTTAGGTCCTGAGTCCTGCTAATCAGATATGATTTAGC
ATTTACTCCCGACCAATGAAAGTTGTTGATATATATTGGA
CCTGTATGATATTGTAAATGACAACCGAGGAAGGTTGAGC
GTTTGCAGACTGGGAAGGATGGCTCGTGTAATATACAAGA
ATGATTTTGTCTTCATGTTTAAA

OTTDART00000054624 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000054624|OTTDARG00000038121|ZDB-GENE-040917-3 atg4b|OTTDARP00000042889 atg4b-002 LG_ CU467043.11 Danio rerio protein_coding KNOWN, 1343 bp
CAGCTACTCTCACATACGATTCATTGCGCTTTGGAGAGAT
CGAAGATTTCCCAGAGACCTCTGATCCTGTCTGGATTTTG
GGAAAGCAGTTCAGCGCTCTAACAGAGAAGGATGATATTC
TGGCAGATGTCACCTCACGTTTATGGTTCACGTACAGAAA
AAACTTCCAGCCAATTGGTGGCACTGGGCCCACTTCAGAC
ACCGGCTGGGGCTGCATGCTTCGATGCGGACAGATGATTC
TTGGGGAGGCTTTGATCTGCAGGCACTTAGGCAGAGAGAG
GTTGTGTATGCCATGGCTGGATTTCGACAGGGGTGCATGT
GCCGTTTCTGAAGAGCCTCGAGAGATGAATGGAGATCTGG
AAGGAGCTTGTGCTTTGGCCGAGGAGGAGACGGCTCTGTG
GAAACCCCTTGTTCTGCTGATTCCTCTAAGACTGGGCCTC
AGTGACATCAATGAAGCCTATATTGAACCACTCAAGGTGA
CGAGCTCATTTATCTAGACCCTCACACCACTCAGCCAGCA
GTGGACCCCAGTGAAGACGGCCATTTCCCAGACGACTCAT
ACCACTGCCAGCACCCTCCATGCCGGATGCACATCTGTGA
GCTCGACCCTTCTATTGCTGCTGGCTTCTTCTGCCAAACT
GAGGATGATTTTGATGACTGGTGTGCACAGATTCGTAAGG
TTTCAAACTGCAGAGGTCTTCCCATGTTTGAATTAGTAGA
CAGTCAACCATCTCATCTAATCACCGCTGATGTACTTAAT
CTCACTCCAGATTTTTCAGATTCAGATCGACTCGAGCGCT
TCTTTGATTCTGAGGATGAAGAATTTGAAATCCTGTCTTT
GTGAAGAACGGTTAGATTTGCCAGACTTTAAGAATTCTGT
GGTAGATCTTCCCTTAAGAGGACAGAGAAGAACACCGTTG
ACGTTCAAGGCCACTGTGGCAAACACACAGCTTTCTTCTT
CAACAGCTCCACTGACTGCTTTGTGAGTGAGCCGAGGTCA
GGTGTCGCGTCACAGGCACTCAGGATCATCAGTATGTATG
TACTTAGCCGCATTTATGTGTATCCACATTGAGTCTTAAC
ACTATTGATTCATTTTTAAGTGATATGGTGCCTTTTTACC
CCCTTAACTTAAAACACAGGTTTGCCATAACACATTTTAT
GGTTTAGGTCCTGAGTCCTGCTAATCAGATATGATTTAGC
ATTTACTCCCGACCAATGAAAGTTGTTGATATATATTGGA
CCTGTATGATATTGTAAATGACAACCGAGGAAGGTTGAGC
GTTTGCAGACTGGGAAGGATGGCTCGTGTAATATACAAGA
ATGATTTTGTCTTCATGTTTAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations