Transcript

hoxa3a-208

ID

ZDB-TSCRIPT-131113-3021

Name

hoxa3a-208 Nomenclature History

Previous Names

hoxa3a-009

Transcript Type

mRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

hoxa3a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000169074 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000169074.2|gene_biotype:protein_coding|ENSDARG00000103862.2 transcript_biotype:protein_coding gene_symbol:hoxa4a cdna chromosome:GRCz11:19:19767567:19769373:1
GGGTTTTGGAGAGATCAGAATACGACAGCACCATAAAAAT
TAGAATTGTTGCACTTTTTCAAATTAATGATCATGAGTTC
CTACTTGATCAATTCAAATTACATCGAACCTTCTTTCCCA
CCCTGCGAGGAATATCACCAGAACGGATACATGCCCGTAT
CCTCTGATTATTATGAACGGCCGAAAGACCCGGGCTTCCC
CCATCACGAGGAGGCATCATACCCGCGATCAAACTACCAA
GAGCAGAGCTATGATTACGGTAATGTGTCAACCAACGATC
TCAACGATTTCAGCGACCGTCATCACGCGCAACCTCAATC
CGTTTCGCAGAATCATGGACCCCGCCTCACCACAGAAAGC
TGTGTGGGTTCGGATGGAAACAAGGACTGTAGCCTCGTGT
CAGACGCTCTCCCGGGCTCACAGAAGAGTAAAGAACCAGT
GGTGTACCCCTGGATGAAAAAAGTCCATGTTAATACCGTG
ACCGCCAGCTACTCTGGAGGAGTGCCCAAGAGGTCTCGCA
CCGCCTACACGCGCCAGCAGGCTCTTGAGCTTGAAAAAGA
GTTCCATTTTAACCGATACCTGACTCGACGTCGACGTGTG
GAGATAGCGCACACTATGTGTCTTTCTGAGCGTCAGGTGA
AAATCTGGTTTCAGAACCGCCGCATGAAGTGGAAGAAAGA
CCACAAGCTGCCCAATACAAAGATCCGCTCCTCGAGCTCT
GCACCCTCCAACCATCACGTGAAAACGGACGCCACTCAGC
AGCAGCAAACGCTGCTTCCTACGCCGTGTTCCTCTAACCT
ATAGTGCTAGAAGCAAATCGGCACAAACGGAACTGAACAA
GAAAGAAGAACACTTAGCAGTATTTGGATCGGAACTTCAC
AGGGTTACTTTTTATTAAATGCCCAAAGTGGCAACCTAAC
TTCGCATTCACAACCTCTTCCTCCATTGTAGTTTGGAAAT
CCCATTCTTCCTGTAAAATAGAATTGCCTCCCTTAAAGGA
ACAATAGTAGAATGTACTTTAACTTGGACAATGGCTCGTT
TTGTTTTCTGTCGTTAACCGAGTCACTTAGTCTTGTTTGT
GGGAATCAACGCTATAGTGACGCGTGTACAAACCGAAGTT
TTAACATGAAGGCACAATAATATAGGAATAATCTTCCTGA
AGTAGTTATCTCATTTGTCTTAGAACCGCATTTTAGAGTG
TTATTAAGTGTATTTACGTCATCAAAGCTGTGAATATTCG
TGTATTTGGTCATTTGTATATTGGTAAAAGATGTCAAGTT
TTAGTAAGCCTGTGTGCAAGTAATTGTAGGCTAATCGTGA
AAAATAAATATGACTTTATTGTGAA

OTTDART00000059435 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000059435|OTTDARG00000015148|ZDB-GENE-000823-3 hoxa3a|OTTDARP00000046336 hoxa3a-009 LG_ CR382300.12 Danio rerio protein_coding KNOWN, 1345 bp
GGGTTTTGGAGAGATCAGAATACGACAGCACCATAAAAAT
TAGAATTGTTGCACTTTTTCAAATTAATGATCATGAGTTC
CTACTTGATCAATTCAAATTACATCGAACCTTCTTTCCCA
CCCTGCGAGGAATATCACCAGAACGGATACATGCCCGTAT
CCTCTGATTATTATGAACGGCCGAAAGACCCGGGCTTCCC
CCATCACGAGGAGGCATCATACCCGCGATCAAACTACCAA
GAGCAGAGCTATGATTACGGTAATGTGTCAACCAACGATC
TCAACGATTTCAGCGACCGTCATCACGCGCAACCTCAATC
CGTTTCGCAGAATCATGGACCCCGCCTCACCACAGAAAGC
TGTGTGGGTTCGGATGGAAACAAGGACTGTAGCCTCGTGT
CAGACGCTCTCCCGGGCTCACAGAAGAGTAAAGAACCAGT
GGTGTACCCCTGGATGAAAAAAGTCCATGTTAATACCGTG
ACCGCCAGCTACTCTGGAGGAGTGCCCAAGAGGTCTCGCA
CCGCCTACACGCGCCAGCAGGCTCTTGAGCTTGAAAAAGA
GTTCCATTTTAACCGATACCTGACTCGACGTCGACGTGTG
GAGATAGCGCACACTATGTGTCTTTCTGAGCGTCAGGTGA
AAATCTGGTTTCAGAACCGCCGCATGAAGTGGAAGAAAGA
CCACAAGCTGCCCAATACAAAGATCCGCTCCTCGAGCTCT
GCACCCTCCAACCATCACGTGAAAACGGACGCCACTCAGC
AGCAGCAAACGCTGCTTCCTACGCCGTGTTCCTCTAACCT
ATAGTGCTAGAAGCAAATCGGCACAAACGGAACTGAACAA
GAAAGAAGAACACTTAGCAGTATTTGGATCGGAACTTCAC
AGGGTTACTTTTTATTAAATGCCCAAAGTGGCAACCTAAC
TTCGCATTCACAACCTCTTCCTCCATTGTAGTTTGGAAAT
CCCATTCTTCCTGTAAAATAGAATTGCCTCCCTTAAAGGA
ACAATAGTAGAATGTACTTTAACTTGGACAATGGCTCGTT
TTGTTTTCTGTCGTTAACCGAGTCACTTAGTCTTGTTTGT
GGGAATCAACGCTATAGTGACGCGTGTACAAACCGAAGTT
TTAACATGAAGGCACAATAATATAGGAATAATCTTCCTGA
AGTAGTTATCTCATTTGTCTTAGAACCGCATTTTAGAGTG
TTATTAAGTGTATTTACGTCATCAAAGCTGTGAATATTCG
TGTATTTGGTCATTTGTATATTGGTAAAAGATGTCAAGTT
TTAGTAAGCCTGTGTGCAAGTAATTGTAGGCTAATCGTGA
AAAATAAATATGACTTTATTGTGAA

Related Transcripts

Transcripts related to hoxa3a

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	hoxa3a-202 (1) Ensembl	Ensembl	492 nt	Select Tool ZFIN BLAST
mRNA	hoxa3a-203 (1) Ensembl	Ensembl	2,200 nt	Select Tool ZFIN BLAST
mRNA	hoxa3a-204 (1) Ensembl	Ensembl	358 nt	Select Tool ZFIN BLAST
mRNA	hoxa3a-205 (1) Ensembl	Ensembl	816 nt	Select Tool ZFIN BLAST
mRNA	hoxa3a-207 (1) Ensembl	Ensembl	405 nt	Select Tool ZFIN BLAST
mRNA	hoxa3a-208	Ensembl	1,345 nt
mRNA	hoxa3a-209 (1) Ensembl	Ensembl	2,202 nt	Select Tool ZFIN BLAST
mRNA	hoxa4a-210 (1) Ensembl	Ensembl	1,725 nt	Select Tool ZFIN BLAST
mRNA	hoxa4a-211 (1) Ensembl	Ensembl	1,519 nt	Select Tool ZFIN BLAST
ncRNA	hoxa3a-007 (1) Ensembl	Ensembl	438 nt	Select Tool ZFIN BLAST
ncRNA	hoxa3a-008 (1) Ensembl	Ensembl	567 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations