Transcript

tube1-201

ID

ZDB-TSCRIPT-121213-852

Name

tube1-201 Nomenclature History

Previous Names

dkey-119m7.7-001
ottdart00000057957

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

tube1 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

OTTDART00000057957 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000057957|OTTDARG00000040395|ZDB-GENE-040426-1174 tube1|OTTDARP00000045388 DKEY-119M7.7-001 LG_ AL954744.8 Danio rerio protein_coding NOVEL, 2388 bp
ATAGCAAACAGCAACGACAACATTGGCAAAATAGCGACAA
CTCAACCGTACAAATGGACGGTGTTTAGAAGCTCTTGTGA
GGATGCCAGACGCCGCTTAGAACCAAGACGAGGAAAAAGA
CACTGCTGAGATGGCGATGTAACTTAACCAATGTCAGTTG
AACTAAAATGGTGTAAACCACTGATCTCCGACTTGTCTGT
TATACATGAGTGTGTAAAATAAAGAGATGACGCAGTCTGT
CGTAGTCCAAGTTGGTCAGTGTGGGAATCAGGTGGGCTGC
CGCTTCTGGGATCTCGCACTCAGAGAACATGCACACGTGA
ATCAAATGGGAGTTTATGATGACGCGCTGAGCAGCTTCTT
TAGGAACGTTGACCAGAGGAGAGGGTACGGAGCAGAGGCA
ACCGGCGGCAAGATCACAGGTCTGAAGGCCAGGGCCGTGT
TAGTGGATATGGAGGAGGGAGTGCTTGGAGGGATTCTGCA
GGGGCCGTTGCGTTCTCTCTTCAGCAGCGCACAGCTCATA
AGCGATGTCTCTGGTTCAGGGAATAACTGGGCAGTCGGGC
ACCACACATATGGTTTGGCCTACAGAGAGCAGATCGTGGA
TCAGGTTCGCAAGGCTGCAGAACACTGTGACTGCCTTCAG
TGCTTCTTCCTTATTCACTCCATGGGGGGAGGAACTGGTT
CAGGGTTAGGCACGTTTGTGTTGAAGCTTCTAGAAGAGGA
GTTCCCAGAGGTGTATCGGATCGTGACCTCCGTTTACCCC
ACTGCAGAAGATGATGTCATCACTTCTCCTTACAACAGCG
TCCTAGCCATGAAAGAACTCACAGAACATGCAGACTGCGT
CCTGCCGGTCGACAACCAGTCTCTGGTTGATATTGTCGGT
AAGATAAAACACATGTCCAACACTGGCAAACCAGGCTGTG
CTATCAAGAAGGACAGTACCATCATCTCTGGACAAGGAGG
GGTGGTGAAGGTGGAGAAGCCCTTTGATGCCATGAACAAC
ATTGTGGCCAATCTGCTTCTTAATATTACCAGTTCAGCGC
GGTTTGAGGGCTCTCTCAACATGGATCTGAATGAGATAGC
CATGAACCTGGTCCCTTTCCCACGTTTACACTACCTTGTG
TCCAGCCTGACTCCTCTCTACACACTGGCTGATGTCAGTG
TGCCACCCCGCAGGCTGGATCAGATGTTCTCGGATGCGTT
CAGTAAGGAGCATCAGCTGATCAGAGCCGACCCCAAACAC
AACCTGTATCTGGCCTGTGCACTCATGCTGCGTGGAAACG
TTCAGCTGTCGGACCTGCGGCGGAACATTGAGAGGCTGAG
GCCCACCCTGCCGTTTGTCCCATGGAATCAGGAAGGATGG
AAGACCAGCCTGTGTTCTGTCCTGCCTGTGGGTCACTCAC
ATTCTCTGCTGGCCTTAGCCAACAACACTTGTGTGAAGTC
CACCTTTTCTGAACTGAGGGAACGCTTTATGAAGCTCTAC
CGTAGGAAGGCTCATTTGCATCATTATCTAGCCGTTGATG
GCATGGAGCAGTCTGGATTCACTGAAGCGCTGTCATCAAT
CTCAACACTTATTGAAGACTACACACACCTGGAATGCCCT
CTCATGCCAAACGCCCCCAGACTCACCATGGCCACCTGAC
CTGTTGGGATCTCGTGTGTGAAAACGCCACTATGAACAAC
ATTGGCTCTTCTATCTATATGTTTGGGCTGCTGGTTGGAG
CGGTGCTGTTCGGAGCCCTTGCTGATAAGTATGGCCGCAG
AATAATCATACTGATCGGTTTAGCAATACAGGCCATCTTC
GGAGTGGGCGCCGCTTTTGCCCCAAATTTCTACATTTACG
TCCTGCTACGCTTCGTGGTGGGCACGACTGTGTCGGCAGT
GATCATGAATGCATTTGTGCTGGGCACTGAGTGGACGGGT
CCTAAAAAGCGCATGTTGGCAGGTGTCATCACAGATTACT
TTTTTGGGTTCGGCTATATCCTGCTTGCAGGGGTGGCCTA
CCTCATCCGAGACTGGCGTAAACTTCAGTTGGCCATTTCT
GCCCCCAGCTTCCTCTTCCTGTTCTATGTCTGGGTGCTTC
CCAAGTCTGCCCGCTGGTTAATGGCCAATAACAAGCATGA
GGAGGCATTGGATCTGATTCGCAAGGCAGCGCTTATTAAT
GGCAAGCCTCTGGAGGACGATGACATGGAGCTCTATCAGA
GTCCTAAAAGCTCAGAAAAACTTCAGGAGCAGAGGAAGTA
CACAGTCTTGGATCTGGTCCGAACGCCTAGAATGAGGAAA
CAGTCCCTCATCCTCTTCTACCTGTGGTTTGTGAACGTCC
TGGTCTATTATGGGCTGTCGCTCAACATTTCAGACTTTGG
TATGAATATCTACCTGACGCAGATGATC

Related Transcripts

Transcripts related to tube1

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	tube1-201	Ensembl	2,388 nt
aberrant processed transcript	tube1-202 (1) Ensembl	Ensembl	2,004 nt	Select Tool ZFIN BLAST
mRNA	ottdart00000004233 (1)	Havana	798 nt	Select Tool ZFIN BLAST NCBI BLAST Ensembl UCSC BLAT
mRNA	tube1-203 (1) Ensembl	Ensembl	2,009 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations