Transcript

sh3gl2a-202

ID
ZDB-TSCRIPT-121213-675
Name
sh3gl2a-202 Nomenclature History
Previous Names
  • sh3gl2-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000152406 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000152406.2|gene_biotype:protein_coding|ENSDARG00000023600.7 transcript_biotype:nonsense_mediated_decay gene_symbol:sh3gl2a cdna chromosome:GRCz11:1:26741744:26782518:-1
TCCCAGTGTACGAGGGTTTATTTCTGAACGTCTCTCATCC
CCGTATCTCTGAACATATTTACATCTCATCCAGGGGTTAG
AAGAATAGCACTAGTCCAATCGGAACCATGTCTGTAGCGG
GACTGAAGAAACAATTCCACAAAGCCACTCAGAGAGTCAG
CGAGAAGGTTGGAGGGGCAGAGGGAACTAAACTAGATGTA
GACTTTACGGAAATGGAAAAGAAGGTTGACACGACCTCGA
GGGCAGTATTAGACATTTTGACGAAGACAACGGAGTACCT
TCAGCCAAATCCAGCAACTCGTGCCAAGATGAGCATGATG
AGCTCCATGTCTAAAATTCGTGGAGGAGATAAAGGTCCTG
GCTACACACAGACTGAAACAACCCTGGGAGAGGCCATGCA
AAAGGCTGGCAGGGAACTTGGCGAGGAATCCTGCTTTGGG
GTGGCTCTGATTGATGTTGGAGAAGCCATGCGAGAGCTTG
GTGAAGTAAAAGATGCTTTAGACATGGAGGTCAAACAAAA
CTTTATTGATCCCTTGCAGAATATTCATGATAAAGACTTA
AAGGAAATCCAGCATCACCTGAAGAAGCTGGAGGGGCGAC
GATTGGACTTTGACTATAAGAAGAAAAGGCAAGGAAAAGT
CACAGAGGATGAGATCAAACAGGCCCTGGAGAAGTTTGAC
GACTCCAAGGAGATTGCCGAACAAAGCATGTTTAATCTTC
TGGAGAACGATGCTCCAAGTGCTCCTGGCGTACATGGACC
TGTTGGCCAGTCCAAGGATTGAGCAAGTGAGTCAGCTTTC
TGCTCTGGTCCAAGCTCAAGTCAACTACCATAGACAGGCG
GCAGAGATTCTTCAGCAGCTGTCCAGCAAGATCGAGGACA
GAATAAGAGAGGCATCTTGTAAGCCAAAAAGAGAGTATGT
GCCCAAA

OTTDART00000048228 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000048228|OTTDARG00000034154|ZDB-GENE-040121-3 sh3gl2|OTTDARP00000037852 sh3gl2-002 LG_ BX005000.11 Danio rerio protein_coding KNOWN, 927 bp
TCCCAGTGTACGAGGGTTTATTTCTGAACGTCTCTCATCC
CCGTATCTCTGAACATATTTACATCTCATCCAGGGGTTAG
AAGAATAGCACTAGTCCAATCGGAACCATGTCTGTAGCGG
GACTGAAGAAACAATTCCACAAAGCCACTCAGAGAGTCAG
CGAGAAGGTTGGAGGGGCAGAGGGAACTAAACTAGATGTA
GACTTTACGGAAATGGAAAAGAAGGTTGACACGACCTCGA
GGGCAGTATTAGACATTTTGACGAAGACAACGGAGTACCT
TCAGCCAAATCCAGCAACTCGTGCCAAGATGAGCATGATG
AGCTCCATGTCTAAAATTCGTGGAGGAGATAAAGGTCCTG
GCTACACACAGACTGAAACAACCCTGGGAGAGGCCATGCA
AAAGGCTGGCAGGGAACTTGGCGAGGAATCCTGCTTTGGG
GTGGCTCTGATTGATGTTGGAGAAGCCATGCGAGAGCTTG
GTGAAGTAAAAGATGCTTTAGACATGGAGGTCAAACAAAA
CTTTATTGATCCCTTGCAGAATATTCATGATAAAGACTTA
AAGGAAATCCAGCATCACCTGAAGAAGCTGGAGGGGCGAC
GATTGGACTTTGACTATAAGAAGAAAAGGCAAGGAAAAGT
CACAGAGGATGAGATCAAACAGGCCCTGGAGAAGTTTGAC
GACTCCAAGGAGATTGCCGAACAAAGCATGTTTAATCTTC
TGGAGAACGATGCTCCAAGTGCTCCTGGCGTACATGGACC
TGTTGGCCAGTCCAAGGATTGAGCAAGTGAGTCAGCTTTC
TGCTCTGGTCCAAGCTCAAGTCAACTACCATAGACAGGCG
GCAGAGATTCTTCAGCAGCTGTCCAGCAAGATCGAGGACA
GAATAAGAGAGGCATCTTGTAAGCCAAAAAGAGAGTATGT
GCCCAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations