Transcript

snapc1a-202

ID
ZDB-TSCRIPT-121213-604
Name
snapc1a-202 Nomenclature History
Previous Names
  • snapc1a-003
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000152382 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000152382.2|gene_biotype:protein_coding|ENSDARG00000029569.8 transcript_biotype:nonsense_mediated_decay gene_symbol:snapc1a cdna chromosome:GRCz11:20:20318823:20324569:-1
GGTCGCTTTCAGCTGAGCGAGTCTGTGCGGTTTGAGGTGT
TTTCGGCTATCTGGAGGGAGCTGGACTTCTCTAGCGTGTT
TTTTGGAATTAGTTCCAAAAGTGAGAAGAGGTCCTTCACA
CGGCTTACTTTCACCACAGCCTACAGTTACCTTCTGCCCC
CATACAGCTTTCAAATTCGTGTCGGGGCTTTGTATCTGAT
CTATGGCCTCTATTATATGCAACCTGCTTGGCCTAAAGAA
AAGATCAGAATTGCTCTGAAGGACTGGTATGATTTGCAGA
AGCTTGTCGTGGATGCAAAAAGTTGCCAGCATCTGGATAT
TGTTTACATCTTTAAAAGGCTTTTGTTAGAGAAGGCCTTT
TATTTCACTGCTTTGCCTAAGAAGCTAACATTTCAATCAA
GTGAACGCATTCAGCATCATGTAAATGAAGAATTTCGGGG
CTGCCGAGATGCAGTGGGTGAAGTTGCTTCAGTTGATATG
CTAGACGAGATTGCCAATGTGCACGGTCATTATGAAAGAC
TGAAGAAATTGTCACTGCCCACATCGCTTGGAGTGACCCT
GATTAATCTGACAGATTCTATTGGACATTGTGTTCTTGAG
TACCGAAAGTGGCAGGAAGAAATCGCATAGTGTGTGTTTT
ATATTGGTACTCAGGCTGCAAAGAAGAAAGACTCCAAACA
GACTGAGACTACTCAGAAATCAGAGTCCACCAGTAGAGCT
GATATGCTTGCCGCCATCAAGTCTAAATCGTGTAGTCATG
CGTCAAAGGGAACAAGATCCAGGCGCCACAGACCAGTTGA
GATAGCTACTACGTCAAATTCTGGAAGTGATCAAGCCTTG
TTGAAAAGTCATGTGAGACCGCCTTCTCTAAAGACCAGGA
CCTATAATCATTTTGGAAAACCAGG

OTTDART00000058158 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000058158|OTTDARG00000004888|ZDB-GENE-040426-1031 snapc1a|OTTDARP00000045533 snapc1a-003 LG_ BX255914.3 Danio rerio protein_coding KNOWN, 905 bp
GGTCGCTTTCAGCTGAGCGAGTCTGTGCGGTTTGAGGTGT
TTTCGGCTATCTGGAGGGAGCTGGACTTCTCTAGCGTGTT
TTTTGGAATTAGTTCCAAAAGTGAGAAGAGGTCCTTCACA
CGGCTTACTTTCACCACAGCCTACAGTTACCTTCTGCCCC
CATACAGCTTTCAAATTCGTGTCGGGGCTTTGTATCTGAT
CTATGGCCTCTATTATATGCAACCTGCTTGGCCTAAAGAA
AAGATCAGAATTGCTCTGAAGGACTGGTATGATTTGCAGA
AGCTTGTCGTGGATGCAAAAAGTTGCCAGCATCTGGATAT
TGTTTACATCTTTAAAAGGCTTTTGTTAGAGAAGGCCTTT
TATTTCACTGCTTTGCCTAAGAAGCTAACATTTCAATCAA
GTGAACGCATTCAGCATCATGTAAATGAAGAATTTCGGGG
CTGCCGAGATGCAGTGGGTGAAGTTGCTTCAGTTGATATG
CTAGACGAGATTGCCAATGTGCACGGTCATTATGAAAGAC
TGAAGAAATTGTCACTGCCCACATCGCTTGGAGTGACCCT
GATTAATCTGACAGATTCTATTGGACATTGTGTTCTTGAG
TACCGAAAGTGGCAGGAAGAAATCGCATAGTGTGTGTTTT
ATATTGGTACTCAGGCTGCAAAGAAGAAAGACTCCAAACA
GACTGAGACTACTCAGAAATCAGAGTCCACCAGTAGAGCT
GATATGCTTGCCGCCATCAAGTCTAAATCGTGTAGTCATG
CGTCAAAGGGAACAAGATCCAGGCGCCACAGACCAGTTGA
GATAGCTACTACGTCAAATTCTGGAAGTGATCAAGCCTTG
TTGAAAAGTCATGTGAGACCGCCTTCTCTAAAGACCAGGA
CCTATAATCATTTTGGAAAACCAGG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations