Transcript

psmc6-202

ID

ZDB-TSCRIPT-121213-255

Name

psmc6-202 Nomenclature History

Previous Names

psmc6-002

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

psmc6 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000152444 (1) [ Show ] (double-click sequence to select)

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>tpe|ENSDART00000152444.2|gene_biotype:protein_coding|ENSDARG00000037038.8 transcript_biotype:nonsense_mediated_decay gene_symbol:psmc6 cdna chromosome:GRCz11:20:9763367:9768749:1
ACGAAGAAGCGCGAGAGCGAAGCGGCAGTGAACATGGCGG
AAAACAGGGAGAAAGGTTTACAAGACTACAGAAAGAAATT
ACTGGAGCATAAAGAGATTGACGGGCGCCTCAAAGAGTTG
AGAGAGCAGCTGAAGGAGCTCACTAAACAATATGAGAAGT
CTGAGAATGACCTGAAGGCTTTACAGAGTGTGGGGCAGAT
TGTCGGTGAAGTGCTGAAACAGCTGACTGAGGAGAAATTT
ATTGTTAAAGCAACTAATGGACCACGATATGTGGTTGGAT
GTCGCAGACAGCTGGATAAATCCAAGCTGAAGCCTGGCAC
TAGAGTGGCTCTGGACATGACAACTCTCACTATCATGAGG
TATTTGCCTCGTGAGGTGGATCCTCTAGTGTACAACATGT
CCCATGAAGACCCTGGTAGCGTTTCATACTCTGAGATTGG
TGGACTGTCTGAGCAGATTCGTGAGCTGAGAGAGGGTGGG
CATTATTCCTCCCAAAGGCTGCCTGCTCTACGGACCTCCA
GGCACTGGAAAGACTCTTCTTGCCAGAGCTGTGGCCAGTC
AGTTGGACTGCAATTTCCTTAAGGTTGTGTCCAGCTCCAT
TGTTGACAAGTACATTGGTGAGAGTGCCAGACTCATCAGA
GAGATGTTCAACTACGCCAGAGACCATCAGCCCTGCATCA
TCTTCATGGACGAGATCGATGCTATTGGTGGACGTCGGTT
TTCTGAAGGAACCTCAGCTGATAGAGAGATCCAGAGGACA
CTGATGGAGCTGCTGAATCAGATGGATGGATTCGACACTC
TTCATAGAGTCAAGATGATCATGGCCACCAACCG

OTTDART00000058031 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000058031|OTTDARG00000004035|ZDB-GENE-030131-304 psmc6|OTTDARP00000045446 psmc6-002 LG_ AL954679.7 Danio rerio protein_coding KNOWN, 834 bp
ACGAAGAAGCGCGAGAGCGAAGCGGCAGTGAACATGGCGG
AAAACAGGGAGAAAGGTTTACAAGACTACAGAAAGAAATT
ACTGGAGCATAAAGAGATTGACGGGCGCCTCAAAGAGTTG
AGAGAGCAGCTGAAGGAGCTCACTAAACAATATGAGAAGT
CTGAGAATGACCTGAAGGCTTTACAGAGTGTGGGGCAGAT
TGTCGGTGAAGTGCTGAAACAGCTGACTGAGGAGAAATTT
ATTGTTAAAGCAACTAATGGACCACGATATGTGGTTGGAT
GTCGCAGACAGCTGGATAAATCCAAGCTGAAGCCTGGCAC
TAGAGTGGCTCTGGACATGACAACTCTCACTATCATGAGG
TATTTGCCTCGTGAGGTGGATCCTCTAGTGTACAACATGT
CCCATGAAGACCCTGGTAGCGTTTCATACTCTGAGATTGG
TGGACTGTCTGAGCAGATTCGTGAGCTGAGAGAGGGTGGG
CATTATTCCTCCCAAAGGCTGCCTGCTCTACGGACCTCCA
GGCACTGGAAAGACTCTTCTTGCCAGAGCTGTGGCCAGTC
AGTTGGACTGCAATTTCCTTAAGGTTGTGTCCAGCTCCAT
TGTTGACAAGTACATTGGTGAGAGTGCCAGACTCATCAGA
GAGATGTTCAACTACGCCAGAGACCATCAGCCCTGCATCA
TCTTCATGGACGAGATCGATGCTATTGGTGGACGTCGGTT
TTCTGAAGGAACCTCAGCTGATAGAGAGATCCAGAGGACA
CTGATGGAGCTGCTGAATCAGATGGATGGATTCGACACTC
TTCATAGAGTCAAGATGATCATGGCCACCAACCG

Related Transcripts

Transcripts related to psmc6

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	psmc6-202	Ensembl		834 nt
mRNA	psmc6-201 (1) Ensembl	Ensembl		1,561 nt	Select Tool

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations