Transcript

slc9a3.1-201

ID
ZDB-TSCRIPT-120213-563
Name
slc9a3.1-201 Nomenclature History
Previous Names
  • slc9a3.1-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000081350 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000081350.6|gene_biotype:protein_coding|ENSDARG00000058498.8 transcript_biotype:nonsense_mediated_decay gene_symbol:slc9a3.1 cdna chromosome:GRCz11:19:10692166:10730478:-1
TGATGGACAGACCGCCAAGTGACTTAACCTTTAGAGATTT
AAAGAAAAACTAGCTTTGAGGGAAACTGAAGTACTTTGTC
TCTCCGAGGACTTTGCCCTTCAGGAAAAGCAAGCAGAAAG
AGCACACTGGGATCCCAAATTGTGAGATTTTTCTGAAGGA
CTGCTATAGCACACAAAGTTTGGAGATGAGAAGGATACTG
TAAGTGCATCGTTATCAGTCGTAATGGCGAGCTCTACTTA
CATCTGCCTGCTGAGGGCAGCTTTCCTGGTTTGTTTGGTT
TACCCTTTAGTCAAAGGAAATTCAGTTGAGGTGTCGGATC
CTCATCATCACCAGACAGAGAATCTCACAGGACTTCCAAT
AGTCACATTTAAGTGGCATCACGTTGAGACCCCGTACTTG
GTGGCCCTTTGGGTGTTTGTGGCTGGATTGGCTAAACTAT
CAGTGATTCAGCTGAACCACAGCATCACCGGTGTGTTTCC
GGAAAGCGGTCTTCTCATTATTCTGGGCTTTATTTTGGGA
GGAATCGTTGTGGGCGCAGACAAAGCGCAGACTTTCAAAC
TGCTTCCTTCCACTTTCTTCTATTACCTGCTGCCTCAGAT
CATCCTGGACGCCAGCTATTTTATGCCCAACAAGCTCTTC
TTCAGAAACTTGGGTGCTATTCTTATTTATGCCATCTTTG
GGACGTGCTGGAACGCAGCTGCTGTAGGACTCTCTCTGTG
GGGCTGCCATGAAGCGGGAGCAATGGGTGACTTGAACATC
GGCCTCCTGCAGTTCCTGTTGTTTGGCAGTTTAATCGCTG
CTGTGGACCCTGTGGCTGTGATCGCCGTCTTTGAAGAAGT
GCATGTGAACGAGGTGCTCTTTATCCTGGTGTTTGGAGAG
TCACTGCTCAATGATGGCGTCACAGTGGTGCTTTACAATG
TGTTTGATGGTTTCGTTTCTCTTGGAGGCCCAATGATTGA
CGCCGCAGAGATTTTTAAGGGCATATGTTCGTTTGTCGTG
GTGGCATTCGGAGGCTCGTTTGTTGGTGTTGCATTTGCCA
TCCTGCTGTCCCTGCTGACCAGATGCACCAAACACGTTCA
GATCATCGAAGCCGGCTTCGTGTTTTTGGTGGGATACCTG
TCCTACCTGACAGCAGAGATGCTCTCACTCTCTGCTATAC
TTTCAATCACTTTCTGCGGTGTGTGCTGTCAGAAATACAT
CAACGCCAACATGGATGAGAGATCAGTCACAACAGTTCGT
CACGCCATGAAGATGCTTGCGAATGGCTCAGAAACCATGA
TCTTCCTGTTTTTGGGCGTTACAGCCATTGACACGGAGAT
CTGGGTCTGGAATACTGGTTTCATCCTCCTCACCCTCCTC
TTCATCTTCATCTACAGGATCATAGGTGTTTTCATGTTCA
CCTGGATGTTAAATAAGTTCCGATTGGTCCCCGTGGAGCT
GATTGACCAGGTGGTGATGAGCTACGGTGGCCTGCGGGGG
GCAGTGGCGTACGGTCTGGCAGCAATGCTGGACGAAAGCA
GGATCCCGGAGAAAAAGTTGATGATCAGCACCACACTCAT
TGTGGTGTATTTCACTGTCATCCTTCAGGGAATCACAATG
AAGCCGTTGGTACAGTGGCTCAAGGTCAAAAGAGCAGCTC
ATTCTGACTTGAAACTTGTTGAGAAACTGAACAACAGGGC
ATTTGATCACATACTAGCCGCAGTGGAGGACATTTGCGGA
CGTATAGGAGATAACTGGTGGACCAGAGGCTGGAACAGGT
TTGAGGAGAAGTATATTAGCTGGCTATTGATGAAACCAAA
GGCCAGAAAGAACAGAGATTACCTGTTCAACATCTTCCAC
AAACTCAATCTGGAGGACGCCATGAACTACGTCAGTGAGG
GTGAACGGCAAGGCTCTCTGGCCTTTATTCGTAATGACGA
AGCTGCCAACGTTGATTTCAAAAAACAGTTCGACTCAGAA
TTTGCAGATGTGATGCCCGATATAATGGTTGATATGTCAA
ACTACGATTTTGGAATTGAAAATATTTCAGTAGCCACCAT
TGTGAAAGACACTATTCCCTCTGTATCTCTGGACATTCAT
GGGCAAGACGGGAAGAATGTGGTCGACGACATCAATGCCC
ATCGCCTTCTACAGCAGCACCTGTACAGGAGCAGAAAACA
TCACCATCACAAATACAGTCGCAGTCACTTCAGCATCAAC
CAGAGTGAAGAGGAGGTGCAGGAGATTTTTCAGAGGACCA
TGAGGAGCCGCCTGGAGTCCTTCAAATCTGCTAAGATGGG
TGTCAACCCTACCAAAAAGATCACTAAGTTCCATAAGAAG
GATCCTACAGATAAGATGAATGGACACACAGAGGGCAATG
GCTATCTGTATGGAGATGAAGCTGACAGTGGGGTTGGTGC
TGATGGTGCTATATCTAGCACTTTCATGAGAGACACGTAT
AAAATGGGAGCAGGCATAGAGAATCCAGTATTTATGCCAG
ACATGGACAGCCCAGTTCACAGTCCAGTTCATAGTCCACC
ATGGCTGCTGGAGACTGAGATGAGCGTCGCTCCTTCCCAG
AGGGCTCAGCGGCGTCTGCCCTGGACACCAAACCGCCGTC
TCGCACCCATGAGGATCAGCACCTGCTCCACAGACTCCTT
CCTGATGGCGGACGTCTCTTCAACACTGGAGGTGCACGAG
GAACAGCCCCAGAGCGACAATGGAGAATCAGTCTTTGAAT
AGACACCTGAGGATGACGTGACACTGTTTTTACCATCTAC
AAAATGGAACTGGAGATTCACTGCCGAAAACCCATTGGAA
CTGCCAAAAACTGGAGCAGACAACAGCACTTAATCCATTC
AGTGGGACATATTTCTAGTTATTTTGTAGCAAAACAAGAT
AAAACACTTCAATGCTTCTCAGCTCATCCAAATTTTGTAT
TCTTTTTTAAACACCCAACAAATGGTTTATTCCCACTGAA
GAGGAAGTGCGGACTTCAACCTATAAAGTAGTCTGTAGTT
TACGTCACAGCGATGGCCATCATTTGCTATTAGACAGCAG
GAGGACGCTTTAAGAAATGCTAGGTAGTCATAACTCAATG
TGGGGTCACATGTGCTCAACCCCATTGCTGTTTTTTCAAT
TCAATTTAAATGACACTTTTTCACCCAACATTTTGGTTTG
TGCCAATTGTTAGGTTAAAATTGGGTTCAGATACAGGAAT
TGAGTTTGACACCCGTGTTGAGACAACCTAGTATTTTTGT
ACACTAGATGGTTTAAAAGCTCATTGACATGAACTAGAAG
CCACAGAACTGATTTTGTGTTATAGTCTCTTTAAGAATGG
TGTGAGGGGGATAGTTTGAGTCTGTGCAATAGTGCTTATA
TTATACTGAGAACAAAGCCATTAAGTTATTCTGAAGATGC
ACCTTGCAGTTTCATTTCAAATGGCACTTTACACCAGTAT
CAAGTCAATATTTAAAGTAAACATTTCATGCTCATAGAAT
GTGGTAGAAATCTGTAATGTCAGGATTTTATTCTGTATGA
CTGAACTGTTACCAAGTATGTTTGAGCAATGGGATGCATC
TAGCTAATCAAGTAATGGTTCTTGGGGTATTTTACTTTTT
TTTGAGGGATTAATAAAGTATTTATGAACATTTCTATTTA
ACTAA

OTTDART00000053525 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000053525|OTTDARG00000014385|ZDB-GENE-060503-545 slc9a3.1|OTTDARP00000042100 slc9a3.1-002 LG_ BX005424.10 Danio rerio protein_coding KNOWN, 3645 bp
TGATGGACAGACCGCCAAGTGACTTAACCTTTAGAGATTT
AAAGAAAAACTAGCTTTGAGGGAAACTGAAGTACTTTGTC
TCTCCGAGGACTTTGCCCTTCAGGAAAAGCAAGCAGAAAG
AGCACACTGGGATCCCAAATTGTGAGATTTTTCTGAAGGA
CTGCTATAGCACACAAAGTTTGGAGATGAGAAGGATACTG
TAAGTGCATCGTTATCAGTCGTAATGGCGAGCTCTACTTA
CATCTGCCTGCTGAGGGCAGCTTTCCTGGTTTGTTTGGTT
TACCCTTTAGTCAAAGGAAATTCAGTTGAGGTGTCGGATC
CTCATCATCACCAGACAGAGAATCTCACAGGACTTCCAAT
AGTCACATTTAAGTGGCATCACGTTGAGACCCCGTACTTG
GTGGCCCTTTGGGTGTTTGTGGCTGGATTGGCTAAACTAT
CAGTGATTCAGCTGAACCACAGCATCACCGGTGTGTTTCC
GGAAAGCGGTCTTCTCATTATTCTGGGCTTTATTTTGGGA
GGAATCGTTGTGGGCGCAGACAAAGCGCAGACTTTCAAAC
TGCTTCCTTCCACTTTCTTCTATTACCTGCTGCCTCAGAT
CATCCTGGACGCCAGCTATTTTATGCCCAACAAGCTCTTC
TTCAGAAACTTGGGTGCTATTCTTATTTATGCCATCTTTG
GGACGTGCTGGAACGCAGCTGCTGTAGGACTCTCTCTGTG
GGGCTGCCATGAAGCGGGAGCAATGGGTGACTTGAACATC
GGCCTCCTGCAGTTCCTGTTGTTTGGCAGTTTAATCGCTG
CTGTGGACCCTGTGGCTGTGATCGCCGTCTTTGAAGAAGT
GCATGTGAACGAGGTGCTCTTTATCCTGGTGTTTGGAGAG
TCACTGCTCAATGATGGCGTCACAGTGGTGCTTTACAATG
TGTTTGATGGTTTCGTTTCTCTTGGAGGCCCAATGATTGA
CGCCGCAGAGATTTTTAAGGGCATATGTTCGTTTGTCGTG
GTGGCATTCGGAGGCTCGTTTGTTGGTGTTGCATTTGCCA
TCCTGCTGTCCCTGCTGACCAGATGCACCAAACACGTTCA
GATCATCGAAGCCGGCTTCGTGTTTTTGGTGGGATACCTG
TCCTACCTGACAGCAGAGATGCTCTCACTCTCTGCTATAC
TTTCAATCACTTTCTGCGGTGTGTGCTGTCAGAAATACAT
CAACGCCAACATGGATGAGAGATCAGTCACAACAGTTCGT
CACGCCATGAAGATGCTTGCGAATGGCTCAGAAACCATGA
TCTTCCTGTTTTTGGGCGTTACAGCCATTGACACGGAGAT
CTGGGTCTGGAATACTGGTTTCATCCTCCTCACCCTCCTC
TTCATCTTCATCTACAGGATCATAGGTGTTTTCATGTTCA
CCTGGATGTTAAATAAGTTCCGATTGGTCCCCGTGGAGCT
GATTGACCAGGTGGTGATGAGCTACGGTGGCCTGCGGGGG
GCAGTGGCGTACGGTCTGGCAGCAATGCTGGACGAAAGCA
GGATCCCGGAGAAAAAGTTGATGATCAGCACCACACTCAT
TGTGGTGTATTTCACTGTCATCCTTCAGGGAATCACAATG
AAGCCGTTGGTACAGTGGCTCAAGGTCAAAAGAGCAGCTC
ATTCTGACTTGAAACTTGTTGAGAAACTGAACAACAGGGC
ATTTGATCACATACTAGCCGCAGTGGAGGACATTTGCGGA
CGTATAGGAGATAACTGGTGGACCAGAGGCTGGAACAGGT
TTGAGGAGAAGTATATTAGCTGGCTATTGATGAAACCAAA
GGCCAGAAAGAACAGAGATTACCTGTTCAACATCTTCCAC
AAACTCAATCTGGAGGACGCCATGAACTACGTCAGTGAGG
GTGAACGGCAAGGCTCTCTGGCCTTTATTCGTAATGACGA
AGCTGCCAACGTTGATTTCAAAAAACAGTTCGACTCAGAA
TTTGCAGATGTGATGCCCGATATAATGGTTGATATGTCAA
ACTACGATTTTGGAATTGAAAATATTTCAGTAGCCACCAT
TGTGAAAGACACTATTCCCTCTGTATCTCTGGACATTCAT
GGGCAAGACGGGAAGAATGTGGTCGACGACATCAATGCCC
ATCGCCTTCTACAGCAGCACCTGTACAGGAGCAGAAAACA
TCACCATCACAAATACAGTCGCAGTCACTTCAGCATCAAC
CAGAGTGAAGAGGAGGTGCAGGAGATTTTTCAGAGGACCA
TGAGGAGCCGCCTGGAGTCCTTCAAATCTGCTAAGATGGG
TGTCAACCCTACCAAAAAGATCACTAAGTTCCATAAGAAG
GATCCTACAGATAAGATGAATGGACACACAGAGGGCAATG
GCTATCTGTATGGAGATGAAGCTGACAGTGGGGTTGGTGC
TGATGGTGCTATATCTAGCACTTTCATGAGAGACACGTAT
AAAATGGGAGCAGGCATAGAGAATCCAGTATTTATGCCAG
ACATGGACAGCCCAGTTCACAGTCCAGTTCATAGTCCACC
ATGGCTGCTGGAGACTGAGATGAGCGTCGCTCCTTCCCAG
AGGGCTCAGCGGCGTCTGCCCTGGACACCAAACCGCCGTC
TCGCACCCATGAGGATCAGCACCTGCTCCACAGACTCCTT
CCTGATGGCGGACGTCTCTTCAACACTGGAGGTGCACGAG
GAACAGCCCCAGAGCGACAATGGAGAATCAGTCTTTGAAT
AGACACCTGAGGATGACGTGACACTGTTTTTACCATCTAC
AAAATGGAACTGGAGATTCACTGCCGAAAACCCATTGGAA
CTGCCAAAAACTGGAGCAGACAACAGCACTTAATCCATTC
AGTGGGACATATTTCTAGTTATTTTGTAGCAAAACAAGAT
AAAACACTTCAATGCTTCTCAGCTCATCCAAATTTTGTAT
TCTTTTTTAAACACCCAACAAATGGTTTATTCCCACTGAA
GAGGAAGTGCGGACTTCAACCTATAAAGTAGTCTGTAGTT
TACGTCACAGCGATGGCCATCATTTGCTATTAGACAGCAG
GAGGACGCTTTAAGAAATGCTAGGTAGTCATAACTCAATG
TGGGGTCACATGTGCTCAACCCCATTGCTGTTTTTTCAAT
TCAATTTAAATGACACTTTTTCACCCAACATTTTGGTTTG
TGCCAATTGTTAGGTTAAAATTGGGTTCAGATACAGGAAT
TGAGTTTGACACCCGTGTTGAGACAACCTAGTATTTTTGT
ACACTAGATGGTTTAAAAGCTCATTGACATGAACTAGAAG
CCACAGAACTGATTTTGTGTTATAGTCTCTTTAAGAATGG
TGTGAGGGGGATAGTTTGAGTCTGTGCAATAGTGCTTATA
TTATACTGAGAACAAAGCCATTAAGTTATTCTGAAGATGC
ACCTTGCAGTTTCATTTCAAATGGCACTTTACACCAGTAT
CAAGTCAATATTTAAAGTAAACATTTCATGCTCATAGAAT
GTGGTAGAAATCTGTAATGTCAGGATTTTATTCTGTATGA
CTGAACTGTTACCAAGTATGTTTGAGCAATGGGATGCATC
TAGCTAATCAAGTAATGGTTCTTGGGGTATTTTACTTTTT
TTTGAGGGATTAATAAAGTATTTATGAACATTTCTATTTA
ACTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations