Transcript

ccdc167-202

ID

ZDB-TSCRIPT-110912-338

Name

ccdc167-202 Nomenclature History

Previous Names

ccdc167-003
ch211-214j24.7-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

ccdc167 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000144658 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000144658.4|gene_biotype:protein_coding|ENSDARG00000045850.8 transcript_biotype:nonsense_mediated_decay gene_symbol:ccdc167 cdna chromosome:GRCz11:4:5255078:5273838:1
GGCAGGAGAGCGAGTGAAGGAATCGTGTACGGAAGTATTT
CCCAACATTTCTTTTCTTTAATTAAACCCTCAAGCTTTCC
AAAATGACCAGAACAAGGACCGTAAAGAAAGAGAAAATAA
GTGTGGCGAGTGAGATTGACCGCGTAGAAGAGCGTAAATT
GCAGTGTAAAAACAGCCTGGAGCGGGCAGAGTTCAGAAAG
AGGAAACAGCAGCTCTCAGACGACGACAGGCTGGCTCTGG
AAGATGAGATGACCATACTGAATGAACGAGTAGAGAAATA
CGAAAAGGATCTGCAGGTGCTGAGAGGAGAAAACCGGAGG
AACATGATGCTGTCCGTCGCTCTGCTAGCCATCAGCGCTC
TTTTCTACTACACATTTATATATTGAAGAGGGGCTCCTGC
TGGAAACTGTGGCCTCACTGGTTGTTGAGCAGCCATCATC
GGAGAGCCAGGCATCATGGGAGCAGCTCCTCCTGCAGGCT
GTGGGTCACAGAGAGACACACGACTTACTATTGAGGAGGC
ATTCAACAAGAAGAGGCAATACACACAACAAGTATTACAC
TTCAAAGGAACTGTTTGTGCTCAGAGAATTAAGTGCTAAG
GTGCACTTAAAAGTTGGACTTTGATGGTTA

OTTDART00000051306 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000051306|OTTDARG00000007587|ZDB-GENE-041210-79 ccdc167|OTTDARP00000040334 CH211-214J24.7-003 LG_ BX323558.7 Danio rerio protein_coding NOVEL, 630 bp
GGCAGGAGAGCGAGTGAAGGAATCGTGTACGGAAGTATTT
CCCAACATTTCTTTTCTTTAATTAAACCCTCAAGCTTTCC
AAAATGACCAGAACAAGGACCGTAAAGAAAGAGAAAATAA
GTGTGGCGAGTGAGATTGACCGCGTAGAAGAGCGTAAATT
GCAGTGTAAAAACAGCCTGGAGCGGGCAGAGTTCAGAAAG
AGGAAACAGCAGCTCTCAGACGACGACAGGCTGGCTCTGG
AAGATGAGATGACCATACTGAATGAACGAGTAGAGAAATA
CGAAAAGGATCTGCAGGTGCTGAGAGGAGAAAACCGGAGG
AACATGATGCTGTCCGTCGCTCTGCTAGCCATCAGCGCTC
TTTTCTACTACACATTTATATATTGAAGAGGGGCTCCTGC
TGGAAACTGTGGCCTCACTGGTTGTTGAGCAGCCATCATC
GGAGAGCCAGGCATCATGGGAGCAGCTCCTCCTGCAGGCT
GTGGGTCACAGAGAGACACACGACTTACTATTGAGGAGGC
ATTCAACAAGAAGAGGCAATACACACAACAAGTATTACAC
TTCAAAGGAACTGTTTGTGCTCAGAGAATTAAGTGCTAAG
GTGCACTTAAAAGTTGGACTTTGATGGTTA

Related Transcripts

Transcripts related to ccdc167

Type	Name	Annotation Method	Has Havana Data	Length (nt)	Analysis
aberrant processed transcript	ccdc167-202	Ensembl		630 nt
mRNA	ccdc167-201 (1) Ensembl	Ensembl		738 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations