Transcript

nup50-002

ID

ZDB-TSCRIPT-110325-290

Name

nup50-002 Nomenclature History

Previous Names

None

Transcript Type

ncRNA

Annotation Status

Annotation Method

Ensembl

Associated With Genes

nup50 (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000148575 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000148575.3|gene_biotype:protein_coding|ENSDARG00000017454.11 transcript_biotype:processed_transcript gene_symbol:nup50 cdna chromosome:GRCz11:4:74943195:74961597:1
ACAATCTAACCAGTGTGTGTGACGCGAACGGTTGGCGGGA
AACGGTGTTCAGTTGAGCTGTGATGGCCAAGCGGATTGCG
GAAAAAGAGTTGACCGACAGGAACTGGGATCAGGAGGATG
ATGGAGAAGAGGTCCTTTAACATTCAGCAGCTCCACCCCC
TCCAAGCCCACAGACGGTGAGGTCACCTCCAACGGCTCCG
CCCCCAGCAGTAAAGAGTACAACCGGCAGCTCACAGCGCT
GAACTGCTCGGTGCGCGACTGGATCACCAAACACGTCAAC
GACAACCCGCTGTGCGACCTCAACCCCATCTTCCGGGACT
ACGAGCGTCACCTGGCCAGCATCGAGAGGAAATACGGCAG
CGGGGCGGCAGACGAAACACCAGGGAAGCCGCTGGCATCC
TGTGCTGCGGCTCCGCAGACCGTCTCCCTCAAAAACAAGG
ACGACAAGCCTCCAGCAGAAAAGCCAGCAGCTCCTCCGGG
AGTCTCCTTTAATTTCGGAAAGAAGGTGGACAGCTCGGTG
CTCGGGGCGCTGTCGTCAGGTGGAGCGCCGTCGTTTTCCT
TCTCCTCTTCGTCTTCTTCTTCTGCTGTGTTTGGCTCAGC
CGTCAGTAGCGTCAGTAGTCCTGTGGTCAACTCGGACAGC
AACAGCCAGACTGCAGATGAGAACGGGGAGGACTCTGAGG
AGCCGCCGGTGCCTGTGGTGAAGGAGATCAAGGAGAAAGA
CGCTTTCTACTCCAAAAAGTGTAAGCTGTTCTACAAGAAA
GACGGCGAGTTTAAGGAGAAGGGCGTCGGGACGCTGCATC
TGAAGATGACCACCGAGAGCAAACTCCAGCTGCTAGTGCG
CGCAGACACCAACCTGGGGAACATCCTGCTGAACATCATG
GTGCCCTCCTCCATGCCCTGCTCACGAACTGGCAAAAACA
ATGTGATGGTGGTGTGTGTGCCAAACCCTCCCGTGGACGA
CAAGAACCCCAGCGTGCCCGTCCCAGTGCTGATCCGCGTC
AAAACAGCCGAGGACGCAGACCAACTGCACCGAGTCCTCC
AGGAGAAGAAAGCCTAAATCACCTCCTGTGTGTGTGTGTA
TATATACAGTACATATATATGTGTGTGTGTGTGACCCACA
CATACACACCCCTGTGAAGCAGCACATGTCCCCCGTCCGT
CTGTCTGTCTGATCGAGAACTGTTATTCTTCTGCATCCCG
TTATTGCTCTGGAAAGCCGTGGGTTCACCGACTGTGAAGT
TACTGTGAGGTTTGATAGTGGAGCGGGAGTCTGGATTCAT
CAACATTCCTCTGAGTTTTAATTTAGCTGCTACTGAAGGA
GTTCTGCGATGGAGGCCGGAGATTTACCGGGACGCTTTTT
CCTTTTGTTGTAGGATTTTCAAGTTCTGTACGGCTTCTCC
CGCTCCTGTAGAGGTCAGTATTACATCCACTCGCTTCTCC
GACTCGCTGATTTTTTTAATGGCAGGGTTTCCACTGAGAG
AACGTCGAGATCAAATCTCCTCTCGGGATGGTGGTATTTA
TTTTTGGCTTTAAGGATGGAGTGTTCGGCGTACGCTGAGC
AACTCGAGGTGTGAGGATGAATGCGGGTTCAACGGCGGTC
TTTCTTTCGTTTCTTTAGCTTTGTTTCTCCCTGTAAGTGG
CCTTTTTAACGCCTTACACCATGAGGTATGCCGTGTTTTA
AGTGTTGAGCAGCTGTTGATCTACTTTACATTCATTTACT
GGTGAATAAATCGAACGAATCTGA

OTTDART00000048651 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000048651|OTTDARG00000034392|ZDB-GENE-030131-1689 nup50|no_translation nup50-002 LG_none FP067450.6,CU694375.11 Danio rerio protein_coding KNOWN, 677 bp
ACAATCTAACCAGTGTGTGTGACGCGAACGGTTGGCGGGA
AACGGTGTTCAGTTGAGCTGTGATGGCCAAGCGGATTGCG
GAAAAAGAGTTGACCGACAGGAACTGGGATCAGGAGGATG
ATGGAGAAGAGGTCCTTTAACATTCAGCAGCTCCACCCCC
TCCAAGCCCACAGACGGTGAGGTCACCTCCAACGGCTCCG
CCCCCAGCAGTAAAGAGTACAACCGGCAGCTCACAGCGCT
GAACTGCTCGGTGCGCGACTGGATCACCAAACACGTCAAC
GACAACCCGCTGTGCGACCTCAACCCCATCTTCCGGGACT
ACGAGCGTCACCTGGCCAGCATCGAGAGGAAATACGGCAG
CGGGGCGGCAGACGAAACACCAGGGAAGCCGCTGGCATCC
TGTGCTGCGGCTCCGCAGACCGTCTCCCTCAAAAACAAGG
ACGACAAGCCTCCAGCAGAAAAGCCAGCAGCTCCTCCGGG
AGTCTCCTTTAATTTCGGAAAGAAGGTGGACAGCTCGGTG
CTCGGGGCGCTGTCGTCAGGTGGAGCGCCGTCGTTTTCCT
TCTCCTCTTCGTCTTCTTCTTCTGCTGTGTTTGGCTCAGC
CGTCAGTAGCGTCAGTAGTCCTGTGGTCAACTCGGACAGC
AACAGCCAGACTGCAGATGAGAACGGGGAGGACTCTG

Related Transcripts

Transcripts related to nup50

Type	Name	Annotation Method	Length (nt)	Analysis
mRNA	nup50-201 (1) Ensembl	Ensembl	2,357 nt	Select Tool
mRNA	nup50-203 (1) Ensembl	Ensembl	3,644 nt	Select Tool ZFIN BLAST
mRNA	nup50-204 (1) Ensembl	Ensembl	193 nt	Select Tool
mRNA	nup50-205 (1) Ensembl	Ensembl	2,092 nt	Select Tool ZFIN BLAST
ncRNA	nup50-002	Ensembl	1,744 nt

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations