Transcript

scn2b-202

ID
ZDB-TSCRIPT-110325-2697
Name
scn2b-202 Nomenclature History
Previous Names
  • scn2b-001
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000162601 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000162601.2|gene_biotype:protein_coding|ENSDARG00000101713.2 transcript_biotype:nonsense_mediated_decay gene_symbol:scn2b cdna chromosome:GRCz11:15:12521379:12545683:-1
ATAATATCAACCAGTTCCCTGCTACAGACACTGCCAGCCA
TATCATAGCACAAAATAAAACACATTTTCCTAGTTTTTTT
GTATGTCTGAAACGGAGAAATAGATCTCAAACGCATTTGT
TTTATTCTTATTTTGCGATCCTTACATTTCCAGCGACCAA
AATGCTCATTTCATTGCATTCTGGGGAAACGCAATGGGCG
TCCGCTTTGAAATTATCCTGTGTTGCAATGGTGATGTTTC
TGGCCTGTCCAGTGATGTCCATGGATGTGCTGGTGCCGGC
GCTGATCAACGCTCTCAACGGGAGTGACGTCAGAATCACA
TGTACTTTCACCTCATGCTACAAGCTGGACCCCAGCAAGT
TTGCAATGAACTGGACATATCAGGAGACAAGCAACAGCAC
AGAGGAGATGTTCATGACCTATAAGAACACCTATAAGATG
ATACCCTTGAAGCCCAGTCGATTTGGAGAGCGAGTCATGT
TTACTGGAAACCTGGATAAGAACGACCTTTCCATCACCAT
CTCGGACGTGCAGCTGACAGACGAGGGCATCTACAACTGC
TATGTGCGCAACCCTCCAGACCGCATTCAGGGCCATGGCA
CCATCCAGTTTGCCGTCCTGACTGAATTACCTCCACCAAG
GGACTCGACCATTGCTGTGGCCATCGGCGCATCTGTGGGG
GGCATCCTTGCTCTGCTCATTCTGTCCATGGTGGTGGTGA
AGTGCATCCGCAGACATAAGAACCAGGAGCTGATCTCAGA
CGAGCAGAAGATGGAAGAAGAGGGCAAAGTAGATGGTGAA
GGAGGCACAGAAGAAGCAACAAAACAGCCCTAACCCGTCA
TGTTAGCCCTGGAGGCCTAATGGATGGTGGAGCTCCATGC
TTCATGTTCTGAAATTTAAGCCTCCTGCCTGAAGATATAT
AAACTTGTTTGACCCTTCATCCTGTTATGGTCCCATTCAA
CACTCCCTGGTATTCTCGTGTAGCGATCAAACATGCCATG
TTAGGAAGATCTCCCTGCCACAGTGCCATGGTGTCCAGTC
ACTGGTGAAAAATAACAGAGGGTTTTAGGCTGCCTCTTCA
ACTCAATATGGCAGCTTAAGGTGATAACAACATCCTATAG
AAATATTCATTTGGTCCACCCTTTTTACAAATTTACTAAA
GTATTTTTTCTGCCACTAGTAACACTAATATTATTAGCCA
TCCAGTATTTCTGCTGAGAATTTTCTAAAGGGATGAGTTT
TAAATTATACAAAATCCTCCTTACAACTGCCAAAGTGTTT
TTTACCCTTATGGTGTTTATACGTCTTGACAGCTTCTTGA
GAAATCACTGCCCTCAACATCCTCTCAGATGGATGCAGAA
ACATATTGTGTGTTTTTGTGCGTGCCTTCTTGTTGTGCTA
GTTTGCTCCAATTGAGTCTAAACGTTTATGTTGTCTAAAG
TAAGTCCAGCAGGTATAACAGCAGGTTATACCTAGAACCT
ACTAAAATGGAAGGACCATCCACCTGTGTTCAAAATTTGT
CATTTTCTAGTTTACAGTACATATTACACCCCTAGAACAT
GTACAATCATTGCATGACAATTTTCTTACATCATACATAA
AAAAAAATTGCACAAAATAAATCACAGATTTGCACAAGCA
TTTGGCATATTCCAAAAATAGGGTATACAGTACTTTGGTG
CCCCAAAGTCTATCAGATGTACTTGTTATTCAACATAATG
TAACTAAAATCATAGGGACTAGAGAATGTCTGTCTAGGCT
GTCTTACCTTTACGAACTTGCATTTATTAACCATATTCTG
TGATTAACAGAAGTCAGACATTGTTATATTGATTTTCATA
ATTTAGGTATAATACATCTCCTTATTAATTTTTAATGTAT
TTAATCAAAGTATATAGGGGATTTATGGTCATCTGTCATA
AGATGACTCTCTGAAATACATCCAACCAAGGCTCAATCTT
GATACGTGATTTTGACCACGATTCTATTTCTGTAGAACCT
GAAATACTTTTCTCCTGGTACATTTTCATGCACTTTTCTT
ATGAAATGTCTACAAAAGGGCATTGCTTCTTGTAGGTACA
ATACTTGCTTCTGGCTACGTTCCTGCACAACTTGAAATAC
ATTGCTCCCAATATGCTCACTGCATTTTTCTTTTGAAGCC
TCCATAAGAACATGTTGTCCTTTGTAAGTATCACATATGC
CAAACTATAATCCAAACGTCTAAGCATTATCTAAAACAAA
TCTGATGGAAAACCCCAGTTACTGTAGCATCCATACCATT
TTATTCATGGGTTTAAGCTCTTTTGTTACACAAACAGTAC
TGCACCATTCCATGTGAGCTAATGAACCAACAACCACAAT
CTGGGAAAAGATATGTGAAAACACATCTGTTTACAAATCT
TACTCATTTTTAAGAGTTTAGATGTCTTTATATGGCATTG
TTAAAAAA

OTTDART00000051081 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000051081|OTTDARG00000035845|ZDB-GENE-070920-1 scn2b|OTTDARP00000040148 scn2b-001 LG_ CU019627.6 Danio rerio protein_coding KNOWN, 2448 bp
ATAATATCAACCAGTTCCCTGCTACAGACACTGCCAGCCA
TATCATAGCACAAAATAAAACACATTTTCCTAGTTTTTTT
GTATGTCTGAAACGGAGAAATAGATCTCAAACGCATTTGT
TTTATTCTTATTTTGCGATCCTTACATTTCCAGCGACCAA
AATGCTCATTTCATTGCATTCTGGGGAAACGCAATGGGCG
TCCGCTTTGAAATTATCCTGTGTTGCAATGGTGATGTTTC
TGGCCTGTCCAGTGATGTCCATGGATGTGCTGGTGCCGGC
GCTGATCAACGCTCTCAACGGGAGTGACGTCAGAATCACA
TGTACTTTCACCTCATGCTACAAGCTGGACCCCAGCAAGT
TTGCAATGAACTGGACATATCAGGAGACAAGCAACAGCAC
AGAGGAGATGTTCATGACCTATAAGAACACCTATAAGATG
ATACCCTTGAAGCCCAGTCGATTTGGAGAGCGAGTCATGT
TTACTGGAAACCTGGATAAGAACGACCTTTCCATCACCAT
CTCGGACGTGCAGCTGACAGACGAGGGCATCTACAACTGC
TATGTGCGCAACCCTCCAGACCGCATTCAGGGCCATGGCA
CCATCCAGTTTGCCGTCCTGACTGAATTACCTCCACCAAG
GGACTCGACCATTGCTGTGGCCATCGGCGCATCTGTGGGG
GGCATCCTTGCTCTGCTCATTCTGTCCATGGTGGTGGTGA
AGTGCATCCGCAGACATAAGAACCAGGAGCTGATCTCAGA
CGAGCAGAAGATGGAAGAAGAGGGCAAAGTAGATGGTGAA
GGAGGCACAGAAGAAGCAACAAAACAGCCCTAACCCGTCA
TGTTAGCCCTGGAGGCCTAATGGATGGTGGAGCTCCATGC
TTCATGTTCTGAAATTTAAGCCTCCTGCCTGAAGATATAT
AAACTTGTTTGACCCTTCATCCTGTTATGGTCCCATTCAA
CACTCCCTGGTATTCTCGTGTAGCGATCAAACATGCCATG
TTAGGAAGATCTCCCTGCCACAGTGCCATGGTGTCCAGTC
ACTGGTGAAAAATAACAGAGGGTTTTAGGCTGCCTCTTCA
ACTCAATATGGCAGCTTAAGGTGATAACAACATCCTATAG
AAATATTCATTTGGTCCACCCTTTTTACAAATTTACTAAA
GTATTTTTTCTGCCACTAGTAACACTAATATTATTAGCCA
TCCAGTATTTCTGCTGAGAATTTTCTAAAGGGATGAGTTT
TAAATTATACAAAATCCTCCTTACAACTGCCAAAGTGTTT
TTTACCCTTATGGTGTTTATACGTCTTGACAGCTTCTTGA
GAAATCACTGCCCTCAACATCCTCTCAGATGGATGCAGAA
ACATATTGTGTGTTTTTGTGCGTGCCTTCTTGTTGTGCTA
GTTTGCTCCAATTGAGTCTAAACGTTTATGTTGTCTAAAG
TAAGTCCAGCAGGTATAACAGCAGGTTATACCTAGAACCT
ACTAAAATGGAAGGACCATCCACCTGTGTTCAAAATTTGT
CATTTTCTAGTTTACAGTACATATTACACCCCTAGAACAT
GTACAATCATTGCATGACAATTTTCTTACATCATACATAA
AAAAAAATTGCACAAAATAAATCACAGATTTGCACAAGCA
TTTGGCATATTCCAAAAATAGGGTATACAGTACTTTGGTG
CCCCAAAGTCTATCAGATGTACTTGTTATTCAACATAATG
TAACTAAAATCATAGGGACTAGAGAATGTCTGTCTAGGCT
GTCTTACCTTTACGAACTTGCATTTATTAACCATATTCTG
TGATTAACAGAAGTCAGACATTGTTATATTGATTTTCATA
ATTTAGGTATAATACATCTCCTTATTAATTTTTAATGTAT
TTAATCAAAGTATATAGGGGATTTATGGTCATCTGTCATA
AGATGACTCTCTGAAATACATCCAACCAAGGCTCAATCTT
GATACGTGATTTTGACCACGATTCTATTTCTGTAGAACCT
GAAATACTTTTCTCCTGGTACATTTTCATGCACTTTTCTT
ATGAAATGTCTACAAAAGGGCATTGCTTCTTGTAGGTACA
ATACTTGCTTCTGGCTACGTTCCTGCACAACTTGAAATAC
ATTGCTCCCAATATGCTCACTGCATTTTTCTTTTGAAGCC
TCCATAAGAACATGTTGTCCTTTGTAAGTATCACATATGC
CAAACTATAATCCAAACGTCTAAGCATTATCTAAAACAAA
TCTGATGGAAAACCCCAGTTACTGTAGCATCCATACCATT
TTATTCATGGGTTTAAGCTCTTTTGTTACACAAACAGTAC
TGCACCATTCCATGTGAGCTAATGAACCAACAACCACAAT
CTGGGAAAAGATATGTGAAAACACATCTGTTTACAAATCT
TACTCATTTTTAAGAGTTTAGATGTCTTTATATGGCATTG
TTAAAAAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations