Transcript

hnf1a-202

ID
ZDB-TSCRIPT-110325-1237
Name
hnf1a-202 Nomenclature History
Previous Names
  • hnf1a-002
Transcript Type
aberrant processed transcript
Annotation Status
nonsense mediated decay
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000074166 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000074166.5|gene_biotype:protein_coding|ENSDARG00000009470.9 transcript_biotype:nonsense_mediated_decay gene_symbol:hnf1a cdna chromosome:GRCz11:8:39802782:39816165:1
ATGGACGGAGGAGAGTCGAGGAGATCAGAAGGTAGCGGTC
GGCTGTCAGCCCTACAGGAGCAGCTGGTGTGGTCTCTACT
GGGTTCAGGACTGTCAAAAGAGTTACTCATCCAGGCCATG
GGAGATCTAGAACGAGAACGGGCCTCATCTGGTGGCGAGA
GGGCAGACCGGGCCGACTGTGAGAGCTCAGAGGAAGGAGA
GATGGACAATCCACCTCCGATCTATCGAGAGCTGGAGAAA
CTGCCGCCTGAAGAGGCCGCAAGACAGAGAGCTCAAGTGG
ACCAGCTGCTACAAGAGGATCCTTGGCACGTGGCTAAAAT
GGTGAAGAGCTACATGCAGCAGCACAACCTTCCCCAGAGA
GAGGTAGTGGAGTCCACTGGTCTCAACCAATCGCATCTGT
CGCAGCACCTCAACAAAGGCACACCCATGAAGAACCAGAA
ACGTGCCGCTCTCTACAGCTGGTACACCAAGAAGCAGGCA
GAGATCAGTCAGCAATTCACAAATGCCAGTCGAGGAGTCA
TGTCGGGTGAGGAACCCGGGGAAGATGTGAGAAAAGGACG
GAGAAACAGATTTAAATGGGGTCCCGCCTCCCTGCAGATC
CTGTTCCAGGCTTATGAACGACAGAAAAACCCCAGTAAGG
AGGAAAGGGAGGGACTGGTGGAGGAGTGCAACAGAGCGGA
GTGTCTTCAGAGGGGAGTTTCTCCTTCTCAGCTGGCTGGC
CTAGGCTCTAATCTGGTCACAGAGGTTCGGGTTTACAACT
GGTTTGCAAATCGGCGTAAAGAGGAGGCATTTCGCCACAA
ACTGGCACTAGATGTGCCCTACAGCAGCCAATCAGCTGCC
TCCACATGCCAGACACTGCCATCCAGTCCTTCACCAGGTC
TGAAGTACAGTCAGACGGTGGTGTGTGAGAGTTTGGGCAC
CGTGAGAAGCTCTGGTGGTGAAGATAGAGGTGCCAGTGTT
CGTTTAGCAAGTCCAGTCCAGCTTGAACCCAGTCACACAC
TCCTGGAGACACACCATCACAAACCAGCATCTGTAGGAGG
CTCTTTACCTCCTGTCAGCACTCTGACTTCCCTGCATGGC
ATGTCCGGATCCTCCGCTGGTGCTCCAGGGCTCTTCATAC
CAAGTGTCATGAGCCTGGGAGATTCCTCACTTCTCATTGG
CTTGACATCCTCTCAACCCCAGACTGTCCCTATCATCAAT
AATGTAGGGGGAGGGTTTACCACCCTTCAGCCAATCTCCT
TTCAGCAGCCACTTCATGCCTCACCTCAGCAGCCAATAGC
ACAGCAGCTTCAGAGTCACATTGCCCCAAGCTCCTTTATG
GCCACAATGGCACAGTTACCATGTCACAATTCTCACCACA
GATCCTGAGGGTCACACAGAATCTGCCATTGAAGAGGATT
CATTACATCTGCAGTCCACTTCACCTGAAGCAGGGTCTTC
AGGCAGTTTGGATCTTTATCCTCAGAGCCAGACAAGTGAA
ACCCATTCTTCACATCTCCAGCTCTCCTCTCCAGCAGGAG
ACATTGATCCTTACATTCCTGCACAGATGGTCTCCACTGC
ACAATAG

OTTDART00000048847 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000048847|OTTDARG00000034517|ZDB-GENE-021206-12 hnf1a|OTTDARP00000038335 hnf1a-002 LG_none CT027598.7,CR376731.13 Danio rerio protein_coding KNOWN, 1567 bp
ATGGACGGAGGAGAGTCGAGGAGATCAGAAGGTAGCGGTC
GGCTGTCAGCCCTACAGGAGCAGCTGGTGTGGTCTCTACT
GGGTTCAGGACTGTCAAAAGAGTTACTCATCCAGGCCATG
GGAGATCTAGAACGAGAACGGGCCTCATCTGGTGGCGAGA
GGGCAGACCGGGCCGACTGTGAGAGCTCAGAGGAAGGAGA
GATGGACAATCCACCTCCGATCTATCGAGAGCTGGAGAAA
CTGCCGCCTGAAGAGGCCGCAAGACAGAGAGCTCAAGTGG
ACCAGCTGCTACAAGAGGATCCTTGGCACGTGGCTAAAAT
GGTGAAGAGCTACATGCAGCAGCACAACCTTCCCCAGAGA
GAGGTAGTGGAGTCCACTGGTCTCAACCAATCGCATCTGT
CGCAGCACCTCAACAAAGGCACACCCATGAAGAACCAGAA
ACGTGCCGCTCTCTACAGCTGGTACACCAAGAAGCAGGCA
GAGATCAGTCAGCAATTCACAAATGCCAGTCGAGGAGTCA
TGTCGGGTGAGGAACCCGGGGAAGATGTGAGAAAAGGACG
GAGAAACAGATTTAAATGGGGTCCCGCCTCCCTGCAGATC
CTGTTCCAGGCTTATGAACGACAGAAAAACCCCAGTAAGG
AGGAAAGGGAGGGACTGGTGGAGGAGTGCAACAGAGCGGA
GTGTCTTCAGAGGGGAGTTTCTCCTTCTCAGCTGGCTGGC
CTAGGCTCTAATCTGGTCACAGAGGTTCGGGTTTACAACT
GGTTTGCAAATCGGCGTAAAGAGGAGGCATTTCGCCACAA
ACTGGCACTAGATGTGCCCTACAGCAGCCAATCAGCTGCC
TCCACATGCCAGACACTGCCATCCAGTCCTTCACCAGGTC
TGAAGTACAGTCAGACGGTGGTGTGTGAGAGTTTGGGCAC
CGTGAGAAGCTCTGGTGGTGAAGATAGAGGTGCCAGTGTT
CGTTTAGCAAGTCCAGTCCAGCTTGAACCCAGTCACACAC
TCCTGGAGACACACCATCACAAACCAGCATCTGTAGGAGG
CTCTTTACCTCCTGTCAGCACTCTGACTTCCCTGCATGGC
ATGTCCGGATCCTCCGCTGGTGCTCCAGGGCTCTTCATAC
CAAGTGTCATGAGCCTGGGAGATTCCTCACTTCTCATTGG
CTTGACATCCTCTCAACCCCAGACTGTCCCTATCATCAAT
AATGTAGGGGGAGGGTTTACCACCCTTCAGCCAATCTCCT
TTCAGCAGCCACTTCATGCCTCACCTCAGCAGCCAATAGC
ACAGCAGCTTCAGAGTCACATTGCCCCAAGCTCCTTTATG
GCCACAATGGCACAGTTACCATGTCACAATTCTCACCACA
GATCCTGAGGGTCACACAGAATCTGCCATTGAAGAGGATT
CATTACATCTGCAGTCCACTTCACCTGAAGCAGGGTCTTC
AGGCAGTTTGGATCTTTATCCTCAGAGCCAGACAAGTGAA
ACCCATTCTTCACATCTCCAGCTCTCCTCTCCAGCAGGAG
ACATTGATCCTTACATTCCTGCACAGATGGTCTCCACTGC
ACAATAG

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations