Transcript

gpx4a-202

ID

ZDB-TSCRIPT-091203-106

Name

gpx4a-202 Nomenclature History

Previous Names

gpx4a-003
ch73-243b8.1-003

Transcript Type

aberrant processed transcript

Annotation Status

nonsense mediated decay

Annotation Method

Ensembl

Associated With Genes

gpx4a (1)

Strain

Non Reference Strain

Genome Resources

RNA Central

None

Note

None

Sequence

ENSDART00000139361 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|ENSDART00000139361.3|gene_biotype:protein_coding|ENSDARG00000068478.6 transcript_biotype:nonsense_mediated_decay gene_symbol:gpx4a cdna chromosome:GRCz11:22:17589608:17595320:-1
GCAGTGTTGTGGGAGTTCAGGGACATTGAGGATTTAATGT
AATTCGCTGTCTGCTGTTTCAGTAGTAAATACTGAAAGGC
AGTCATGCGTTTCTTAGGGTCTGCTGTCGTTTTCTCTCTA
GTGTTGCAGACTATGTCTGCACAGCTAGAGGACTGGCAGA
CGGCCAAATCCATTTATGAATTCACAGCCACAGATATAGA
TGGAAATGAAGTTTCCCTGGAAAAGTACAGGAACCAGGAA
CTAATTCCCAAATCAAGGAATTCGCCAAGTCATACAATGC
AGAGTTTGACATGTTCAGCAAGATTGATGTGAATGGCGAC
GGGGCTCATCCGCTCTGGAAGTGGCTGAAGGATCAGCCTA
ATGGAAAAGGATTCCTTGGAAATGGCATCAAATGGAATTT
CACAAAGTTCCTTATTAACCGTGAAGGCCAGGTTGTGAAG
AGATACTCCCCACTGCAGGATCCAAGTGTGGTGGAGAAGG
ATCTTTCTAAATATCTCTAATGTGCTGGATGAGCTGAACT
AGCGTCTGAGCGCTGGGTGTGAGTGATGCCGCTCATGGAC
TGATGAAGGTTTGTTTGGAAACCCCTTGTTGAGGAAAGAA
CAGACCTGATGTGTTTGGCGTGCACCTCCTCCTGAGGGCA
TCACGAGTGCTCAGCGTCAGTCCGCAGAGAGGACAGATGA
AGAGACATGCTTTTTATTAGCACTAAACATGCTGATGTAG
TGTACATTTATTAATAAATGCAAAGAGATTCTGCTGAACA
GTA

OTTDART00000045829 (1) [ Show ] (double-click sequence to select)

[Download]

>tpe|OTTDART00000045829|OTTDARG00000032753|ZDB-GENE-030410-2 gpx4a|OTTDARP00000048794 gpx4a-003 LG_ CU695074.11 Danio rerio protein_coding KNOWN, 763 bp
GCAGTGTTGTGGGAGTTCAGGGACATTGAGGATTTAATGT
AATTCGCTGTCTGCTGTTTCAGTAGTAAATACTGAAAGGC
AGTCATGCGTTTCTTAGGGTCTGCTGTCGTTTTCTCTCTA
GTGTTGCAGACTATGTCTGCACAGCTAGAGGACTGGCAGA
CGGCCAAATCCATTTATGAATTCACAGCCACAGATATAGA
TGGAAATGAAGTTTCCCTGGAAAAGTACAGGAACCAGGAA
CTAATTCCCAAATCAAGGAATTCGCCAAGTCATACAATGC
AGAGTTTGACATGTTCAGCAAGATTGATGTGAATGGCGAC
GGGGCTCATCCGCTCTGGAAGTGGCTGAAGGATCAGCCTA
ATGGAAAAGGATTCCTTGGAAATGGCATCAAATGGAATTT
CACAAAGTTCCTTATTAACCGTGAAGGCCAGGTTGTGAAG
AGATACTCCCCACTGCAGGATCCAAGTGTGGTGGAGAAGG
ATCTTTCTAAATATCTCTAATGTGCTGGATGAGCTGAACT
AGCGTCTGAGCGCTGGGTGTGAGTGATGCCGCTCATGGAC
TGATGAAGGTTTGTTTGGAAACCCCTTGTTGAGGAAAGAA
CAGACCTGATGTGTTTGGCGTGCACCTCCTCCTGAGGGCA
TCACGAGTGCTCAGCGTCAGTCCGCAGAGAGGACAGATGA
AGAGACATGCTTTTTATTAGCACTAAACATGCTGATGTAG
TGTACATTTATTAATAAATGCAAAGAGATTCTGCTGAACA
GTA

Related Transcripts

Transcripts related to gpx4a

Type	Name	Annotation Method	Length (nt)	Analysis
aberrant processed transcript	gpx4a-202	Ensembl	763 nt
mRNA	gpx4a-201 (1) Ensembl	Ensembl	898 nt	Select Tool
mRNA	gpx4a-203 (1) Ensembl	Ensembl	841 nt	Select Tool
mRNA	gpx4a-204 (1) Ensembl	Ensembl	1,282 nt	Select Tool ZFIN BLAST

Segment Relationships

Protein Products

No data available

Supporting Sequences

Citations