Transcript

rpgrip1-201

ID
ZDB-TSCRIPT-091110-1194
Name
rpgrip1-201 Nomenclature History
Previous Names
  • dkey-86e23.2-001
  • rpgrip1-001
  • ch211-227i15.1-001
  • si:dkey-86e23.2-001
Transcript Type
mRNA
Annotation Status
Annotation Method
Ensembl
Associated With Genes
Strain
TU
Non Reference Strain
Genome Resources
RNA Central
None
Note
None
Sequence
ENSDART00000138541 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|ENSDART00000138541.3|gene_biotype:protein_coding|ENSDARG00000076055.7 transcript_biotype:protein_coding  cdna chromosome:GRCz11:24:7748751:7777389:-1
GACGTGATTTTTCCAGCCATATGCTGCTCATATCAGTCAT
TTTAAACTTTTTGCTTGATTTTTTTTGTTCTTGGAGAAAA
TTTCAATACTTGCATATGGATTTGTAACTGATACAGGCAG
GAACACAAGAGTGGAGGAGGAGCAGAAAGAGATTAAGCAG
ATTAAAGCTGGATTGATGAAGCAGCGTCTTTCCAAGAACG
AGAGAAACTAATCATCGAATCATAAACAAATGTTCATGTT
GCTGATGACGAGCTGAATATTAGAAAGACAGCAGTGTATA
AGAAAGGCATGATGGCTGAACAGACCTGCTGAACAGAAAT
GACAGAGAAACACAGAGATGGATTAACACTCAATGCTAAA
GCTCAATGCTTTGCACAAGACACACTGTTGCACAGGCAGT
GATTAGGTGGAGCTGTTGTCATAATGTCACTTGCAGTGGA
TGAGACAGCAGGTGATCTCCCGGTGAGGGATGTGGGCTTG
AGAGCTGGACTGATAACTCTTCTCGCAGACACAGATCATG
ACACCAGAAGCTGGAGAAGACAACCACAGGTGCTCAAGAT
AAAAGATCGTCAGCGATTATTCAGAGTACCACGCGAGCAG
CTGGAGGACCAGTGTCACCGACTACAGGAGGAAAACACAC
TTCTCAAACAACACAGCCGCACACAAGAGCAAAAACTACG
CAGGTTGTCAACTAAACTGCTGCGGTTAAAGCATGGATCA
TCAGCTTCTGGTCGGGACGGAGAGCTGGAGGACACCATTG
AAGAGCTAGAGGCTCGTGTAGCGACCCTAGAGAGTCAGAA
GGGGGCGCTACAGAGTAAACTTAATTTAGCCAAGCAACAC
ATCCTAGATCTGGGAGTCAGAACACATATCAGGCCACGAA
CAGGGCGAGGTGTAGACGGTGATGGAGGGGTCAGACGAGC
TGCCCAAACTGCTCCTGCCCGCTGTGGCATCAGTTCCCTG
GACGACACCAGAGGAGAGATGGACCGATTACTTGCTTTAC
TCAGCAGATCCACAGTCATAGAAAGCCAGCAGGGCAGAGT
GGCAGAGCTGGAGTTGACTGCTCAGTCACTAAGAGAAACA
CTCAGAGACAAAGAGAGAGAAATCGAAGGTATCGTTAAAG
ACCTGCGCAAACAACAAGTGGATGGACACAGACTTATTAT
AAAAGATAATGTAGATGTGATCAGACTGCAGAAGCAGCTC
TCTGAAAAGAGTGCGGCCCTTCTGGTTATTCAGGAAAAGT
TTGGCGGGCTTCAGGAGGCTTACGAGAATCAGCTGGAGGA
GGGCCAGAAGTCTTTAAAAGAGAGCCAGGAAGCACTGCTG
GGGAAGGTGGAAGAACTGAGTGAGCAGCTGAAACAGGAGA
AGCAAAGAGTGCTAACTCTCGAAGGTCAGCTCAGTGCGGC
CACTTTTTCACTGCAGGCTCTGGGGGAGCTTCAGGAGAGG
GTTTTAGACCTGGAGGGGGAGAGAAACCTCTTGAAGAAGA
GCTATGACTCCCTTCTGGAGAGCACTATGTCCATCCAGAA
CCATCAAGGAGATAAACATGAAGAAAAAGAGGAAAGAAAG
GAAGAGTTAAGAGAGGAAGGATGGAGAGAGGAACTTCAGA
GGCTTAAAGAAAGACTGGAGGAAGCAAGGAGTGAAAGGAA
AACACTGGAGCAGGAGAAAGAACAGATGAGGCATGAGATT
GATCAAGTTAAAAAGGAGAAGGAGCGAGATAAAGATATGG
TTATGTTCCTCAGAGAAAAACACGACTGCTTGGAGCGAGA
AGTGCTGCAACACAGACAGGAAGTCACATTGTTGCAAGAG
AAATTAGACTCAGTTACAAAAGAGTTTGATATGAGTGTGG
AGGATCTGAGTGAGACTTTGCTGCAGATTAAGGCCTTCAG
AATGCAGCAGGAGACTCAAGGTGTGATGCGCTTTCTGAAA
ACAGATGTAAAGTTTGAAGACACATCAAGGGATTTGACCG
CAGTACAGGCCTCGTATGCAGAAACAGTTTTAGAACTCCA
GAAAACCAGAGACTTATTATTACTACAGCATCGCCTTAAC
GCTGATCTCCAGAATGAGATGACGACAGTTCTTGAAAAAT
CTGAAAGCGAGAGAGAGGAGAACAGGAGGAGGGCAGAAGA
AAAAGACAAGTTGTTAAAAAGCAGAGGCCTTCAGATCAGC
AATTTGCAAGCTCAGCTCAAAGAGTTAGCATATAGCCCTA
GAAACAATAAGCGGGCCATACCCCTGCAGTACACCTGGAC
AGGGCTAGAACAAGACTCAGTGCGGCCCACTGTGGAGAGT
GCCATAATCACACATCTGCATGGAGGAGAATCCCTTCTGG
AGGTCCATCTCACAGGAGCCACATTCACACCACTTGGACT
GAGACTCATGGCACAAGACACAGGAGAGCACCAGGGGGTT
GCGACTTTTTGCACCTATGGCTTTCTAGATTTTGAAGTCC
TCTCAACTTCGTTAATGTCAGGTGGTCAGCCAAATTATGG
CTTCACGTCGCAATATGCTCTCTCTGCTTTTGACCTGGAG
AAGCTCATGGTTCAGGGTGGGTTCATCGCTGTTGAACTGC
ATCAGGCGCTCGGAGGGGTAAAATTTCTGACACGAGGAAG
AGCGAGGATCTCGTTGATGGAAGCACTACAGCGCAGAGGT
GAACGAGTGAAAAACAGAACCAACCTCATAGGAGTGGATG
GGGAAGTCATAGGAATCCTTGAGTTTTGGGTGTGTTTACA
TCCTCAGGTGGAACGCACTGAACCTCAGATGGAACGAGTA
ACAAGTAGAACTCCTGTAAGACACACCAGAGGCTCAGAGT
GGGCTCATGGGGAACCAGAGGAGATGTATGATTTCGGTGT
AGGCATACCCAACGAGCTTGAGGTGGTTTTGGAGCGCTGT
GTAGGTCTCAGTACCCGCTGGCCAGGCCTTCTCCCTGATG
CCTACCTGACGTATCGCCTTTATGACCTACCACCTCATTC
TACACCCATAATCCAATGCTGTGTGGATCCTGTCTTTGAA
GACTCTGCAAGCTATCCGTTAGCTGTAACCACAGATGTAC
TAGAATACCTGAATGTGGGAAGTCTGTGGGTCTATGTGTT
TGATGACGGCGACAGTCAGACGTCTCACACTTATTTGGCA
AAGACACCCATTCCACTACGATCCCTTGCAGCAGGCAGAC
CAATCAGAGGTGATTATGTGCTTAGAGACCCTGCTGGAAG
TCCAAGGGGAATGGTGAGGGTCTCTCTCAGGTGGAAGTAC
CCCTTCCAGTCACCTGAAGTGCCCTCAAGACAAAGAGAAG
GAGCAGAGAAGGAAAGGATGATGCCGAGTGCTGAAGTGTC
ACAGAGACCTATTGCAAAGCCCAGGTCACAGCTTCGGCCT
CCGTCTGGTCGTGAAGCCACTGACACTCACCAATCCACAC
CCCTTCGAAAATCTGAACGACATTTGATCACATCCCATCA
GTCCCCATCCATTCAGGTGTCTGAAGCCAGTTCAGATCGG
CAGAAACCTCCAGCTCAGCCATCGAGGTCAGTTAGAAGGA
AGCACCGTCCTGCAACACTGTCCAACCAGAAACCCACAAC
TCCACCTTACCGGAGTTCTGCCATGTCTACTCAATCACCT
GATGCTAATGCTGTTACTGACTTCAGAGCATCGGTGTCAG
AGCCGAGCACTCCACGGAGTCAAAGAAGCTGCAGAAGCGA
CTCTGAACAGGAAGTTGAAGAACAGGATGATGAAACAGAA
GACAAAACTCAAAGTGACGTAGACGTCCTTCACTCTGAAG
AATCGAGAGAATCAAATGGAAGTGATGTCGTCATAATTCC
TCACCCTCCAAAGCCACAAAAAAAGGGAGACCGACTCAGA
GTGGAAATCCTTTCACTGTCTTTTAACCCTTCATCCAGTA
TTGCACTTGACCAGTCAGTGCATCAGGTCTACGTAGAGTA
CCGCCTTCTAGGTGTTCCCATGGAGACAACAGAAACCCCC
ATGTCACTTCGTAAACCAACAGACGGGGAGGAAATACACT
ATAACTTTACACGAGTTATCCATGTGGATTCAGTGGGAGC
AGCTCCACTGAGACACTACCTCTACACCATGCTGGAAGGC
ACTGACCCCAACCAGGGCAGGCTAAAGTTCACAGTGGTCA
GTGAGCCCATGAAGGAGCAAGAAGAATGTGAAGATGTCGG
CTATGCCTACTTGGATTTACGAGAACTTCTGCTGACTGGA
AATGATGTTATTGAAAAACAAATCAATGTTGTCAGTCCGA
ATGAAGAGCAGGAAGTGGTGGGAAAGCTGAAAGTCTCTGT
AGAAGCTGCTCAGGCTCTGACTGGAATCTATCAGGAATAT
CATCAGACTGTAAAGAGGAACAGAAGAGATCCTCCAAGCA
GCACAGAGGATGAGGAAGAAGAAGGGACAAAGAAAAAGGA
GGAGTTGCATGTGCTCGATTTTGAAGTTGACGAAGACAGT
GATTTTTATTGAAACTCTCCTCTCAAACCAGGCTAGTCTC
AAAAAGAACATCAATTGATTTTTTTTATAGAAAAAAAAAT
GCTTTTGTGACATTGTAACCATATTCAATACTCATCAAAT
TGTTTTATGTCGTCGTGCTGAAATGCAAAATCAATGGAAA
ATCCAAAAGGAGGAAGTTGCTTTAGGAACATAATAGTTTA
TTTTATTTATTAA

OTTDART00000044292 (1) [ Show ] (double-click sequence to select) [Download]
>tpe|OTTDART00000044292|OTTDARG00000031785|ZDB-GENE-091204-394 rpgrip1|OTTDARP00000035058 DKEY-86E23.2-001 LG_ CR925835.5 Danio rerio protein_coding KNOWN, 4653 bp
GACGTGATTTTTCCAGCCATATGCTGCTCATATCAGTCAT
TTTAAACTTTTTGCTTGATTTTTTTTGTTCTTGGAGAAAA
TTTCAATACTTGCATATGGATTTGTAACTGATACAGGCAG
GAACACAAGAGTGGAGGAGGAGCAGAAAGAGATTAAGCAG
ATTAAAGCTGGATTGATGAAGCAGCGTCTTTCCAAGAACG
AGAGAAACTAATCATCGAATCATAAACAAATGTTCATGTT
GCTGATGACGAGCTGAATATTAGAAAGACAGCAGTGTATA
AGAAAGGCATGATGGCTGAACAGACCTGCTGAACAGAAAT
GACAGAGAAACACAGAGATGGATTAACACTCAATGCTAAA
GCTCAATGCTTTGCACAAGACACACTGTTGCACAGGCAGT
GATTAGGTGGAGCTGTTGTCATAATGTCACTTGCAGTGGA
TGAGACAGCAGGTGATCTCCCGGTGAGGGATGTGGGCTTG
AGAGCTGGACTGATAACTCTTCTCGCAGACACAGATCATG
ACACCAGAAGCTGGAGAAGACAACCACAGGTGCTCAAGAT
AAAAGATCGTCAGCGATTATTCAGAGTACCACGCGAGCAG
CTGGAGGACCAGTGTCACCGACTACAGGAGGAAAACACAC
TTCTCAAACAACACAGCCGCACACAAGAGCAAAAACTACG
CAGGTTGTCAACTAAACTGCTGCGGTTAAAGCATGGATCA
TCAGCTTCTGGTCGGGACGGAGAGCTGGAGGACACCATTG
AAGAGCTAGAGGCTCGTGTAGCGACCCTAGAGAGTCAGAA
GGGGGCGCTACAGAGTAAACTTAATTTAGCCAAGCAACAC
ATCCTAGATCTGGGAGTCAGAACACATATCAGGCCACGAA
CAGGGCGAGGTGTAGACGGTGATGGAGGGGTCAGACGAGC
TGCCCAAACTGCTCCTGCCCGCTGTGGCATCAGTTCCCTG
GACGACACCAGAGGAGAGATGGACCGATTACTTGCTTTAC
TCAGCAGATCCACAGTCATAGAAAGCCAGCAGGGCAGAGT
GGCAGAGCTGGAGTTGACTGCTCAGTCACTAAGAGAAACA
CTCAGAGACAAAGAGAGAGAAATCGAAGGTATCGTTAAAG
ACCTGCGCAAACAACAAGTGGATGGACACAGACTTATTAT
AAAAGATAATGTAGATGTGATCAGACTGCAGAAGCAGCTC
TCTGAAAAGAGTGCGGCCCTTCTGGTTATTCAGGAAAAGT
TTGGCGGGCTTCAGGAGGCTTACGAGAATCAGCTGGAGGA
GGGCCAGAAGTCTTTAAAAGAGAGCCAGGAAGCACTGCTG
GGGAAGGTGGAAGAACTGAGTGAGCAGCTGAAACAGGAGA
AGCAAAGAGTGCTAACTCTCGAAGGTCAGCTCAGTGCGGC
CACTTTTTCACTGCAGGCTCTGGGGGAGCTTCAGGAGAGG
GTTTTAGACCTGGAGGGGGAGAGAAACCTCTTGAAGAAGA
GCTATGACTCCCTTCTGGAGAGCACTATGTCCATCCAGAA
CCATCAAGGAGATAAACATGAAGAAAAAGAGGAAAGAAAG
GAAGAGTTAAGAGAGGAAGGATGGAGAGAGGAACTTCAGA
GGCTTAAAGAAAGACTGGAGGAAGCAAGGAGTGAAAGGAA
AACACTGGAGCAGGAGAAAGAACAGATGAGGCATGAGATT
GATCAAGTTAAAAAGGAGAAGGAGCGAGATAAAGATATGG
TTATGTTCCTCAGAGAAAAACACGACTGCTTGGAGCGAGA
AGTGCTGCAACACAGACAGGAAGTCACATTGTTGCAAGAG
AAATTAGACTCAGTTACAAAAGAGTTTGATATGAGTGTGG
AGGATCTGAGTGAGACTTTGCTGCAGATTAAGGCCTTCAG
AATGCAGCAGGAGACTCAAGGTGTGATGCGCTTTCTGAAA
ACAGATGTAAAGTTTGAAGACACATCAAGGGATTTGACCG
CAGTACAGGCCTCGTATGCAGAAACAGTTTTAGAACTCCA
GAAAACCAGAGACTTATTATTACTACAGCATCGCCTTAAC
GCTGATCTCCAGAATGAGATGACGACAGTTCTTGAAAAAT
CTGAAAGCGAGAGAGAGGAGAACAGGAGGAGGGCAGAAGA
AAAAGACAAGTTGTTAAAAAGCAGAGGCCTTCAGATCAGC
AATTTGCAAGCTCAGCTCAAAGAGTTAGCATATAGCCCTA
GAAACAATAAGCGGGCCATACCCCTGCAGTACACCTGGAC
AGGGCTAGAACAAGACTCAGTGCGGCCCACTGTGGAGAGT
GCCATAATCACACATCTGCATGGAGGAGAATCCCTTCTGG
AGGTCCATCTCACAGGAGCCACATTCACACCACTTGGACT
GAGACTCATGGCACAAGACACAGGAGAGCACCAGGGGGTT
GCGACTTTTTGCACCTATGGCTTTCTAGATTTTGAAGTCC
TCTCAACTTCGTTAATGTCAGGTGGTCAGCCAAATTATGG
CTTCACGTCGCAATATGCTCTCTCTGCTTTTGACCTGGAG
AAGCTCATGGTTCAGGGTGGGTTCATCGCTGTTGAACTGC
ATCAGGCGCTCGGAGGGGTAAAATTTCTGACACGAGGAAG
AGCGAGGATCTCGTTGATGGAAGCACTACAGCGCAGAGGT
GAACGAGTGAAAAACAGAACCAACCTCATAGGAGTGGATG
GGGAAGTCATAGGAATCCTTGAGTTTTGGGTGTGTTTACA
TCCTCAGGTGGAACGCACTGAACCTCAGATGGAACGAGTA
ACAAGTAGAACTCCTGTAAGACACACCAGAGGCTCAGAGT
GGGCTCATGGGGAACCAGAGGAGATGTATGATTTCGGTGT
AGGCATACCCAACGAGCTTGAGGTGGTTTTGGAGCGCTGT
GTAGGTCTCAGTACCCGCTGGCCAGGCCTTCTCCCTGATG
CCTACCTGACGTATCGCCTTTATGACCTACCACCTCATTC
TACACCCATAATCCAATGCTGTGTGGATCCTGTCTTTGAA
GACTCTGCAAGCTATCCGTTAGCTGTAACCACAGATGTAC
TAGAATACCTGAATGTGGGAAGTCTGTGGGTCTATGTGTT
TGATGACGGCGACAGTCAGACGTCTCACACTTATTTGGCA
AAGACACCCATTCCACTACGATCCCTTGCAGCAGGCAGAC
CAATCAGAGGTGATTATGTGCTTAGAGACCCTGCTGGAAG
TCCAAGGGGAATGGTGAGGGTCTCTCTCAGGTGGAAGTAC
CCCTTCCAGTCACCTGAAGTGCCCTCAAGACAAAGAGAAG
GAGCAGAGAAGGAAAGGATGATGCCGAGTGCTGAAGTGTC
ACAGAGACCTATTGCAAAGCCCAGGTCACAGCTTCGGCCT
CCGTCTGGTCGTGAAGCCACTGACACTCACCAATCCACAC
CCCTTCGAAAATCTGAACGACATTTGATCACATCCCATCA
GTCCCCATCCATTCAGGTGTCTGAAGCCAGTTCAGATCGG
CAGAAACCTCCAGCTCAGCCATCGAGGTCAGTTAGAAGGA
AGCACCGTCCTGCAACACTGTCCAACCAGAAACCCACAAC
TCCACCTTACCGGAGTTCTGCCATGTCTACTCAATCACCT
GATGCTAATGCTGTTACTGACTTCAGAGCATCGGTGTCAG
AGCCGAGCACTCCACGGAGTCAAAGAAGCTGCAGAAGCGA
CTCTGAACAGGAAGTTGAAGAACAGGATGATGAAACAGAA
GACAAAACTCAAAGTGACGTAGACGTCCTTCACTCTGAAG
AATCGAGAGAATCAAATGGAAGTGATGTCGTCATAATTCC
TCACCCTCCAAAGCCACAAAAAAAGGGAGACCGACTCAGA
GTGGAAATCCTTTCACTGTCTTTTAACCCTTCATCCAGTA
TTGCACTTGACCAGTCAGTGCATCAGGTCTACGTAGAGTA
CCGCCTTCTAGGTGTTCCCATGGAGACAACAGAAACCCCC
ATGTCACTTCGTAAACCAACAGACGGGGAGGAAATACACT
ATAACTTTACACGAGTTATCCATGTGGATTCAGTGGGAGC
AGCTCCACTGAGACACTACCTCTACACCATGCTGGAAGGC
ACTGACCCCAACCAGGGCAGGCTAAAGTTCACAGTGGTCA
GTGAGCCCATGAAGGAGCAAGAAGAATGTGAAGATGTCGG
CTATGCCTACTTGGATTTACGAGAACTTCTGCTGACTGGA
AATGATGTTATTGAAAAACAAATCAATGTTGTCAGTCCGA
ATGAAGAGCAGGAAGTGGTGGGAAAGCTGAAAGTCTCTGT
AGAAGCTGCTCAGGCTCTGACTGGAATCTATCAGGAATAT
CATCAGACTGTAAAGAGGAACAGAAGAGATCCTCCAAGCA
GCACAGAGGATGAGGAAGAAGAAGGGACAAAGAAAAAGGA
GGAGTTGCATGTGCTCGATTTTGAAGTTGACGAAGACAGT
GATTTTTATTGAAACTCTCCTCTCAAACCAGGCTAGTCTC
AAAAAGAACATCAATTGATTTTTTTTATAGAAAAAAAAAT
GCTTTTGTGACATTGTAACCATATTCAATACTCATCAAAT
TGTTTTATGTCGTCGTGCTGAAATGCAAAATCAATGGAAA
ATCCAAAAGGAGGAAGTTGCTTTAGGAACATAATAGTTTA
TTTTATTTATTAA

Segment Relationships
Protein Products
No data available
Supporting Sequences
Citations